A Developing Therapeutic Decision Tree for Ductal Breast Cancer with Emphasis on the TNBC Subtype

Subtypes defined in early transcriptional profiling efforts () are illustrated in the upper tier. TNBC subtypes () are illustrated in the salmon-colored boxes. Subtypes now defined as tumor intrinsic are in the blue area, and subtypes defined as due to invading immune or other stromal cells are in the green extrinsic area. The therapeutic actions proposed in the boxes are suggested by Jiang et al. and/or by the published literature. The question mark after the JAK/STAT suggestion reflects uncertainty about the utility of drugging a pathway that may be generated by invading stromal cells.
A Developing Therapeutic Decision Tree for Ductal Breast Cancer with Emphasis on the TNBC Subtype

Publication

Therapeutic Clues from an Integrated Omic Assessment of East Asian Triple Negative Breast Cancers. (2019) Laura M. Heiser, et al. Cancer Cell. 2019 Mar 18;35(3):341-343. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates HER2 HER2 ncbigene_synonym ERBB2 2064
Homo sapiens Primates HRD HRD ncbigene_synonym TBCE 6905
Homo sapiens Primates STAT STAT ncbigene_synonym SOAT1 6646
Homo sapiens Primates STAT STAT famplex_relations STAT1 6772
Homo sapiens Primates STAT STAT famplex_relations STAT2 6773
Homo sapiens Primates STAT STAT famplex_relations STAT3 6774
Homo sapiens Primates STAT STAT famplex_relations STAT4 6775
Homo sapiens Primates STAT STAT famplex_relations STAT6 6778
Homo sapiens Primates STAT STAT famplex_relations STAT5A 6776
Homo sapiens Primates STAT STAT famplex_relations STAT5B 6777
Homo sapiens Primates JAK JAK famplex_relations JAK1 3716
Homo sapiens Primates JAK JAK famplex_relations JAK2 3717
Homo sapiens Primates JAK JAK famplex_relations JAK3 3718
Homo sapiens Primates JAK JAK famplex_relations TYK2 7297
Homo sapiens Primates PI3K PI3K ncbigene_synonym PIK3CA 5290
Homo sapiens Primates PI3K PI3K ncbigene_synonym PIK3CB 5291
Homo sapiens Primates PI3K PI3K ncbigene_synonym PIK3CD 5293
Homo sapiens Primates PI3K PI3K ncbigene_synonym PIK3CG 5294
Homo sapiens Primates PI3K PI3K famplex_relations PIK3R3 8503
Homo sapiens Primates PI3K PI3K famplex_relations PIK3R4 30849
Homo sapiens Primates PI3K PI3K famplex_relations PIK3R5 23533
Homo sapiens Primates PI3K PI3K famplex_relations PIK3R6 146850
Homo sapiens Primates PI3K PI3K famplex_relations PIK3R1 5295
Homo sapiens Primates PI3K PI3K famplex_relations PIK3R2 5296
Homo sapiens Primates CDK4,6inhibitor CDK4 ncbigene_symbol CDK4 1019
Homo sapiens Primates CDK4,6 CDK6 ncbigene_symbol CDK6 1021
Homo sapiens Primates PARP PARP ncbigene_synonym PARP1 142
Homo sapiens Primates PARP PARP ncbigene_synonym COL11A2 1302
Homo sapiens Primates PARP PARP famplex_relations PARP2 10038
Homo sapiens Primates PARP PARP famplex_relations PARP3 10039
Homo sapiens Primates PARP PARP famplex_relations PARP4 143
Homo sapiens Primates PARP PARP famplex_relations PARP6 56965
Homo sapiens Primates PARP PARP famplex_relations PARP8 79668
Homo sapiens Primates PARP PARP famplex_relations PARP9 83666
Homo sapiens Primates PARP PARP famplex_relations PARP10 84875
Homo sapiens Primates PARP PARP famplex_relations PARP11 57097
Homo sapiens Primates PARP PARP famplex_relations PARP12 64761
Homo sapiens Primates PARP PARP famplex_relations PARP14 54625
Homo sapiens Primates PARP PARP famplex_relations PARP15 165631
Homo sapiens Primates PARP PARP famplex_relations PARP16 54956
Homo sapiens Primates PARP PARP famplex_relations TNKS 8658
Homo sapiens Primates PARP PARP famplex_relations TNKS2 80351
Homo sapiens Primates PARP PARP famplex_relations TIPARP 25976
Homo sapiens Primates CDKN2A CDKN2A ncbigene_symbol CDKN2A 1029
Homo sapiens Primates PIКЗСАТи PI3 ncbigene_symbol PI3 5266
Drosophila melanogaster Invertebrates low LOW ncbigene_symbol Low 44325
Drosophila melanogaster Invertebrates HRD HRD ncbigene_synonym Cyp6d4 42682
Drosophila melanogaster Invertebrates STAT STAT ncbigene_synonym Stat92E 42428
Drosophila melanogaster Invertebrates JAK JAK ncbigene_synonym hop 32080
Drosophila melanogaster Invertebrates JAK JAK ncbigene_synonym bsk 44801
Drosophila melanogaster Invertebrates PI3K PI3K ncbigene_synonym Pi3K21B 33203
Drosophila melanogaster Invertebrates PI3K PI3K ncbigene_synonym Pi3K59F 37733
Drosophila melanogaster Invertebrates PI3K PI3K ncbigene_synonym Pi3K68D 39329
Drosophila melanogaster Invertebrates PI3K PI3K ncbigene_synonym Pi3K92E 42446
Drosophila melanogaster Invertebrates CDK4,6inhibitor CDK4 ncbigene_symbol Cdk4 36854
Drosophila melanogaster Invertebrates PARP PARP ncbigene_symbol Parp 3355109
Drosophila melanogaster Invertebrates PIКЗСАТи PI ncbigene_symbol pi 5656965

Chemical mentions

Word Match MeSH Name ChEBI
Estrogen estrogen mesh:D004967 Estrogens chebi:50114
Androgen Androgens mesh:D000728 androgen chebi:50113

Disease mentions

Word Match MeSH Name DOID
Ductal Breast Cancer NA mesh:D001943