A Developing Therapeutic Decision Tree for Ductal Breast Cancer with Emphasis on the TNBC Subtype
Subtypes defined in early transcriptional profiling efforts () are illustrated in the upper tier. TNBC subtypes () are illustrated in the salmon-colored boxes. Subtypes now defined as tumor intrinsic are in the blue area, and subtypes defined as due to invading immune or other stromal cells are in the green extrinsic area. The therapeutic actions proposed in the boxes are suggested by Jiang et al. and/or by the published literature. The question mark after the JAK/STAT suggestion reflects uncertainty about the utility of drugging a pathway that may be generated by invading stromal cells.

Publication
Therapeutic Clues from an Integrated Omic Assessment of East Asian Triple Negative Breast Cancers. (2019) Laura M. Heiser, et al. Cancer Cell. 2019 Mar 18;35(3):341-343. Figure: F1.Organism | Group | Word | Match | Source | NCBI Symbol | NCBI ID |
---|---|---|---|---|---|---|
Homo sapiens | Primates | HER2 | HER2 | ncbigene_synonym | ERBB2 | 2064 |
Homo sapiens | Primates | HRD | HRD | ncbigene_synonym | TBCE | 6905 |
Homo sapiens | Primates | STAT | STAT | ncbigene_synonym | SOAT1 | 6646 |
Homo sapiens | Primates | STAT | STAT | famplex_relations | STAT1 | 6772 |
Homo sapiens | Primates | STAT | STAT | famplex_relations | STAT2 | 6773 |
Homo sapiens | Primates | STAT | STAT | famplex_relations | STAT3 | 6774 |
Homo sapiens | Primates | STAT | STAT | famplex_relations | STAT4 | 6775 |
Homo sapiens | Primates | STAT | STAT | famplex_relations | STAT6 | 6778 |
Homo sapiens | Primates | STAT | STAT | famplex_relations | STAT5A | 6776 |
Homo sapiens | Primates | STAT | STAT | famplex_relations | STAT5B | 6777 |
Homo sapiens | Primates | JAK | JAK | famplex_relations | JAK1 | 3716 |
Homo sapiens | Primates | JAK | JAK | famplex_relations | JAK2 | 3717 |
Homo sapiens | Primates | JAK | JAK | famplex_relations | JAK3 | 3718 |
Homo sapiens | Primates | JAK | JAK | famplex_relations | TYK2 | 7297 |
Homo sapiens | Primates | PI3K | PI3K | ncbigene_synonym | PIK3CA | 5290 |
Homo sapiens | Primates | PI3K | PI3K | ncbigene_synonym | PIK3CB | 5291 |
Homo sapiens | Primates | PI3K | PI3K | ncbigene_synonym | PIK3CD | 5293 |
Homo sapiens | Primates | PI3K | PI3K | ncbigene_synonym | PIK3CG | 5294 |
Homo sapiens | Primates | PI3K | PI3K | famplex_relations | PIK3R3 | 8503 |
Homo sapiens | Primates | PI3K | PI3K | famplex_relations | PIK3R4 | 30849 |
Homo sapiens | Primates | PI3K | PI3K | famplex_relations | PIK3R5 | 23533 |
Homo sapiens | Primates | PI3K | PI3K | famplex_relations | PIK3R6 | 146850 |
Homo sapiens | Primates | PI3K | PI3K | famplex_relations | PIK3R1 | 5295 |
Homo sapiens | Primates | PI3K | PI3K | famplex_relations | PIK3R2 | 5296 |
Homo sapiens | Primates | CDK4,6inhibitor | CDK4 | ncbigene_symbol | CDK4 | 1019 |
Homo sapiens | Primates | CDK4,6 | CDK6 | ncbigene_symbol | CDK6 | 1021 |
Homo sapiens | Primates | PARP | PARP | ncbigene_synonym | PARP1 | 142 |
Homo sapiens | Primates | PARP | PARP | ncbigene_synonym | COL11A2 | 1302 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP2 | 10038 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP3 | 10039 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP4 | 143 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP6 | 56965 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP8 | 79668 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP9 | 83666 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP10 | 84875 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP11 | 57097 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP12 | 64761 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP14 | 54625 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP15 | 165631 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | PARP16 | 54956 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | TNKS | 8658 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | TNKS2 | 80351 |
Homo sapiens | Primates | PARP | PARP | famplex_relations | TIPARP | 25976 |
Homo sapiens | Primates | CDKN2A | CDKN2A | ncbigene_symbol | CDKN2A | 1029 |
Homo sapiens | Primates | PIКЗСАТи | PI3 | ncbigene_symbol | PI3 | 5266 |
Drosophila melanogaster | Invertebrates | low | LOW | ncbigene_symbol | Low | 44325 |
Drosophila melanogaster | Invertebrates | HRD | HRD | ncbigene_synonym | Cyp6d4 | 42682 |
Drosophila melanogaster | Invertebrates | STAT | STAT | ncbigene_synonym | Stat92E | 42428 |
Drosophila melanogaster | Invertebrates | JAK | JAK | ncbigene_synonym | hop | 32080 |
Drosophila melanogaster | Invertebrates | JAK | JAK | ncbigene_synonym | bsk | 44801 |
Drosophila melanogaster | Invertebrates | PI3K | PI3K | ncbigene_synonym | Pi3K21B | 33203 |
Drosophila melanogaster | Invertebrates | PI3K | PI3K | ncbigene_synonym | Pi3K59F | 37733 |
Drosophila melanogaster | Invertebrates | PI3K | PI3K | ncbigene_synonym | Pi3K68D | 39329 |
Drosophila melanogaster | Invertebrates | PI3K | PI3K | ncbigene_synonym | Pi3K92E | 42446 |
Drosophila melanogaster | Invertebrates | CDK4,6inhibitor | CDK4 | ncbigene_symbol | Cdk4 | 36854 |
Drosophila melanogaster | Invertebrates | PARP | PARP | ncbigene_symbol | Parp | 3355109 |
Drosophila melanogaster | Invertebrates | PIКЗСАТи | PI | ncbigene_symbol | pi | 5656965 |
Word | Match | MeSH | Name | ChEBI |
---|---|---|---|---|
Estrogen | estrogen | mesh:D004967 | Estrogens | chebi:50114 |
Androgen | Androgens | mesh:D000728 | androgen | chebi:50113 |
Disease mentions
Word | Match | MeSH | Name | DOID |
---|---|---|---|---|
Ductal Breast Cancer | NA | mesh:D001943 |