Pathways of one-carbon metabolism

Pathways of one-carbon metabolism. Folate cofactors are used in the distribution of one-carbon units across two distinct metabolic cycles, one relating to the de novo synthesis of DNA and the other involved in providing methyl groups for at least 40 different methyltransferase reactions. In the DNA synthesis cycle, formyl derivatives of tetrahydrofolate (THF) are used in de novo purine biosynthesis. In de novo pyrimidine biosynthesis, 5,10-methyleneTHF is required in the conversion of deoxyuridine monophosphate (dUMP) to deoxythymidine monophosphate (dTMP). Thus folate cofactors play an essential role in cellular proliferation. The THF cofactor pool also provides a continuous supply of methyl groups for biologic methylation reactions via the conversion of homocysteine to methionine, using 5-methylTHF as the methyl donor, with vitamin B12-dependent methionine synthase (MS) transferring the methyl group to homocysteine. (In liver and kidney homocysteine is also remethylated to methionine through an alternative folate-independent pathway involving betaine homocysteine methyltransferase.) Methionine is then converted to S-adenosylmethionine (SAM), the cosubstrate of all methyltransferase enzymes. This cycle is completed by the regeneration of homocysteine from S-adenosylhomocysteine (SAH), the coproduct of the methylation process. Methylenetetrahydrofolate reductase (MTHFR) catalyzes the irreversible conversion of 5,10-methyleneTHF to 5-methylTHF, thereby committing one-carbon units to methylation reactions and away from DNA synthesis. Mitochondrial and cytosolic folate-linked metabolism of serine and formate generate the majority of one-carbon groups for all of these processes. In addition to all of the enzymes involved in folate pathways, the reduced folate carrier (RFC), folate receptors (FRs), proton coupled folate transporter (PCFT), and mitochondrial folate transporter (MFT) play key roles in maintaining folate concentrations within the cell.
Pathways of one-carbon metabolism

Publication

The Search for Genetic Polymorphisms in the Homocysteine/Folate Pathway That Contribute to the Etiology of Human Neural Tube Defects. (2009) Anne M. Molloy, et al. Birth Defects Res A Clin Mol Teratol. 2009 Apr;85(4):285-294. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Drosophila melanogaster Invertebrates AND AND ncbigene_synonym CkIIbeta 32132
Drosophila melanogaster Invertebrates AND AND ncbigene_synonym Andorra 32798
Drosophila melanogaster Invertebrates AND AND ncbigene_synonym Anp 43595
Drosophila melanogaster Invertebrates AND AND ncbigene_synonym Acam 44913
Drosophila melanogaster Invertebrates FRs FRS ncbigene_synonym PheRS-m 36547
Drosophila melanogaster Invertebrates FRs FRS ncbigene_synonym Z600 39673
Drosophila melanogaster Invertebrates RFC; RFC ncbigene_symbol Rf-c 5657049
Drosophila melanogaster Invertebrates RFC; RFC ncbigene_synonym CG8142 32763
Drosophila melanogaster Invertebrates RFC; RFC ncbigene_synonym RfC4 38492
Drosophila melanogaster Invertebrates RFC; RFC ncbigene_synonym Gnf1 40607
Drosophila melanogaster Invertebrates +SAH SAH ncbigene_symbol sah 5658327
Drosophila melanogaster Invertebrates MS MS ncbigene_symbol Ms 44324
Drosophila melanogaster Invertebrates DHF DHF ncbigene_synonym Hf 44038
Drosophila melanogaster Invertebrates SAM SAM ncbigene_symbol sam 44534
Drosophila melanogaster Invertebrates SAM SAM ncbigene_synonym qkr54B 36966
Drosophila melanogaster Invertebrates SAM SAM ncbigene_synonym sls 44013
Drosophila melanogaster Invertebrates SAM SAM ncbigene_synonym Sam-S 48552
Homo sapiens Primates PCFT PCFT ncbigene_synonym SLC46A1 113235
Homo sapiens Primates RFC; RFC ncbigene_synonym RFC1 5981
Homo sapiens Primates RFC; RFC ncbigene_synonym SLC19A1 6573
Homo sapiens Primates RFC; RFC famplex_relations RFC2 5982
Homo sapiens Primates RFC; RFC famplex_relations RFC3 5983
Homo sapiens Primates RFC; RFC famplex_relations RFC4 5984
Homo sapiens Primates RFC; RFC famplex_relations RFC5 5985
Homo sapiens Primates MTHFR MTHFR ncbigene_symbol MTHFR 4524
Homo sapiens Primates +SAH SAH ncbigene_synonym ACSM3 6296
Homo sapiens Primates MS MS ncbigene_symbol MS 4397
Homo sapiens Primates (vit VIT ncbigene_symbol VIT 5212
Homo sapiens Primates B12) B12 ncbigene_synonym NDUFB3 4709
Homo sapiens Primates B12) B12 ncbigene_synonym TNFAIP1 7126
Homo sapiens Primates MFT MFT ncbigene_synonym CYLD 1540
Homo sapiens Primates MFT MFT ncbigene_synonym SLC25A32 81034

Chemical mentions

Word Match MeSH Name ChEBI
Cystathionine Cystathionine mesh:D003540 cystathionine chebi:17755
Folate Folic Acid mesh:D005492 folic acid chebi:27470
Folic Acid Folic Acid mesh:D005492 folic acid chebi:27470
Folic acid Folic Acid mesh:D005492 folic acid chebi:27470
Glycine Glycine mesh:D005998 glycine chebi:15428
THF Homocysteine Homocysteine mesh:D006710 homocysteine chebi:17230
Methionine NA mesh:D008715
Serine Serine mesh:D012694 L-serine chebi:17115

Disease mentions

Word Match MeSH Name DOID