Five-step biotransformation of 1,2,3-trichloropropane into glycerol by the enzymes of the synthetic biodegradation pathway
Five-step biotransformation of 1,2,3-trichloropropane into glycerol by the enzymes of the synthetic biodegradation pathway. The pathway consists of haloalkane dehalogenase DhaA from Rhodococcus rhodochrous NCIMB 13064 [] with the haloalcohol dehalogenase HheC and epoxide hydrolase EchA from Agrobacterium radiobacter AD1 [, ]. Computer-assisted protein engineering was used to improve activity of the haloalkane dehalogenase towards 1,2,3-trichloropropane, leading to the development of the 32-fold more active and 26-fold more efficient mutant DhaA31 []. Formed glycerol can be utilized in central catabolic pathways of the host cell
Publication
Exacerbation of substrate toxicity by IPTG in Escherichia coli BL21(DE3) carrying a synthetic metabolic pathway. (2015) Pavel Dvorak, et al. Microb Cell Fact. 2015;14:201. Figure: F1.| Organism | Group | Word | Match | Source | NCBI Symbol | NCBI ID |
|---|---|---|---|---|---|---|
| Drosophila melanogaster | Invertebrates | .CI | CI | ncbigene_symbol | ci | 43767 |
| Drosophila melanogaster | Invertebrates | TCP | TCP | ncbigene_symbol | Tcp | 252807 |
| Drosophila melanogaster | Invertebrates | DCP | DCP | ncbigene_synonym | Cbp53E | 36905 |
| Drosophila melanogaster | Invertebrates | GDL | GDL | ncbigene_symbol | gdl | 3772583 |
| Drosophila melanogaster | Invertebrates | GDL | GDL | ncbigene_synonym | Arp1 | 41566 |
| Drosophila melanogaster | Invertebrates | CPD | CPD | ncbigene_synonym | svr | 30998 |
| Drosophila melanogaster | Invertebrates | CPD | CPD | ncbigene_synonym | dlg1 | 32083 |
| Drosophila melanogaster | Invertebrates | and | AND | ncbigene_synonym | CkIIbeta | 32132 |
| Drosophila melanogaster | Invertebrates | and | AND | ncbigene_synonym | Andorra | 32798 |
| Drosophila melanogaster | Invertebrates | and | AND | ncbigene_synonym | Anp | 43595 |
| Drosophila melanogaster | Invertebrates | and | AND | ncbigene_synonym | Acam | 44913 |
| Homo sapiens | Primates | -HCI | HCI | ncbigene_synonym | TIMP1 | 7076 |
| Homo sapiens | Primates | -HCI | HCI | ncbigene_synonym | HEMC | 7909 |
| Homo sapiens | Primates | TCP | TCP | ncbigene_synonym | SPINK1 | 6690 |
| Homo sapiens | Primates | DCP | DCP | ncbigene_synonym | ACE | 1636 |
| Homo sapiens | Primates | EchA | ECHA | ncbigene_synonym | HADHA | 3030 |
| Homo sapiens | Primates | CPD | CPD | ncbigene_symbol | CPD | 1362 |
| Homo sapiens | Primates | CPD | CPD | ncbigene_synonym | HOMER2 | 9455 |
| Word | Match | MeSH | Name | ChEBI |
|---|---|---|---|---|
| glycidol | NA | mesh:C004312 | ||
| glycerol-3-phosphate | NA | mesh:C029620 | ||
| epichlorohydrin | Epichlorohydrin | mesh:D004811 | epichlorohydrin | chebi:37144 |
| glycerol | Glycerol | mesh:D005990 | glycerol | chebi:17754 |
| GLY | Glycine | mesh:D005998 | glycine | chebi:15428 |
Disease mentions
| Word | Match | MeSH | Name | DOID |
|---|