Canonical and non-canonical nuclear factor (NF)KB activation pathways

Schematic representation of the canonical and non-canonical nuclear factor (NF)-κB activation pathways. The canonical NF-κB pathway (upper) can be activated by a wide range of various stimuli, including tumor necrosis factor (TNF)-α, interlukin (IL)-1, lipopolysaccharide (LPS), and Toll-like receptors ligand (such as CD40L). Initiation of the canonical pathway via Toll-like receptor or cytokine receptor signaling depends on the inhibitor of κB kinase (IKK) complex, which is composed of the kinases IKKα and IKKβ, and the regulatory subunit IKKγ (NEMO). Activated IKK phosphorylates the inhibitory subunit IκBα leading to its degradation. The released NF-κB dimers (p50-p65) translocate to the nucleus and bind to κB site of chromosome to induce transcription of NF-κB targeted genes. The non-canonical pathway (lower) is activated by specific stimuli including B cell activating factor (BAF) belonging to the TNF family receptor, LPS, lymphotoxin (LT) α1β2, receptor activator of NF-κB (RANK), and CD40L. NF-κB inducing kinase (NIK) is stabilized. When stimulated, NIK is activated and recruits IKKα to the p100 complex to phosphorylate p100, leading to p100 ubiquitination. P52, the processing product of p100, generates the activated p52/RelB NF-κB complex, which is able to translocate to the nucleus and induce the downstream gene expressions.
Canonical and non-canonical nuclear factor (NF)KB activation pathways

Publication

NF-kappaB Signaling Pathways in Neurological Inflammation: A Mini Review. (2015) Ruey-Horng Shih, et al. Front Mol Neurosci. 2015;8:77. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Mus musculus Rodents TNF-a TNF-A ncbigene_synonym Tnf 21926
Mus musculus Rodents IL-1/ IL-1 ncbigene_synonym Il1 111343
Mus musculus Rodents p65 P65 ncbigene_synonym Rela 19697
Mus musculus Rodents p65 P65 ncbigene_synonym Gorasp1 74498
Mus musculus Rodents p50 P50 ncbigene_synonym Cdc37 12539
Mus musculus Rodents p50 P50 ncbigene_synonym Lsp1 16985
Mus musculus Rodents p50 P50 ncbigene_synonym Nfkb1 18033
Mus musculus Rodents p50 P50 ncbigene_synonym Pold2 18972
Mus musculus Rodents p50 P50 ncbigene_synonym Cd40 21939
Mus musculus Rodents p50 P50 ncbigene_synonym Dctn2 69654
Mus musculus Rodents IKKB IKKB ncbigene_synonym Ikbkb 16150
Mus musculus Rodents LPS/ LPS ncbigene_synonym Tlr4 21898
Mus musculus Rodents CD40L CD40L ncbigene_synonym Cd40lg 21947
Mus musculus Rodents p52 P52 ncbigene_synonym Gtf2h4 14885
Mus musculus Rodents p52 P52 ncbigene_synonym Nfkb2 18034
Mus musculus Rodents p52 P52 ncbigene_synonym Igbp1 18518
Mus musculus Rodents RelB RELB ncbigene_symbol Relb 19698
Mus musculus Rodents BAF BAF ncbigene_symbol baf 12016
Mus musculus Rodents BAF BAF ncbigene_synonym Banf1 23825
Mus musculus Rodents p100 P100 ncbigene_synonym Tpx2 72119
Mus musculus Rodents IKKa IKKA ncbigene_synonym Chuk 12675
Mus musculus Rodents NIK NIK ncbigene_synonym Map4k4 26921
Mus musculus Rodents NIK NIK ncbigene_synonym Map3k14 53859
Mus musculus Rodents RANK/ RANK ncbigene_synonym Tnfrsf11a 21934
Homo sapiens Primates IKB-a IKBA ncbigene_synonym NFKBIA 4792
Homo sapiens Primates TNF-a TNF-A ncbigene_synonym TNF 7124
Homo sapiens Primates IKKY IKKG ncbigene_synonym IKBKG 8517
Homo sapiens Primates IL-1/ IL-1 ncbigene_synonym IL1B 3553
Homo sapiens Primates p65 P65 ncbigene_synonym RELA 5970
Homo sapiens Primates p65 P65 ncbigene_synonym SYT1 6857
Homo sapiens Primates p65 P65 ncbigene_synonym GORASP1 64689
Homo sapiens Primates p65 P65 ncbigene_synonym WNK1 65125
Homo sapiens Primates p50 P50 ncbigene_synonym CD40 958
Homo sapiens Primates p50 P50 ncbigene_synonym ARHGEF7 8874
Homo sapiens Primates p50 P50 ncbigene_synonym ASCC1 51008
Homo sapiens Primates p50 P50 ncbigene_synonym H3P40 115482723
Homo sapiens Primates IKK IKK famplex_relations CHUK 1147
Homo sapiens Primates IKK IKK famplex_relations IKBKB 3551
Homo sapiens Primates IKK IKK famplex_relations IKBKE 9641
Homo sapiens Primates IKK IKK famplex_relations TBK1 29110
Homo sapiens Primates LPS/ LPS ncbigene_synonym IRF6 3664
Homo sapiens Primates CD40L CD40L ncbigene_synonym CD40LG 959
Homo sapiens Primates p52 P52 ncbigene_synonym FKBP4 2288
Homo sapiens Primates p52 P52 ncbigene_synonym GTF2H4 2968
Homo sapiens Primates p52 P52 ncbigene_synonym NFKB2 4791
Homo sapiens Primates p52 P52 ncbigene_synonym PMPCB 9512
Homo sapiens Primates p52 P52 ncbigene_synonym PSIP1 11168
Homo sapiens Primates p52 P52 ncbigene_synonym H3P42 115482704
Homo sapiens Primates RelB RELB ncbigene_symbol RELB 5971
Homo sapiens Primates BAF BAF ncbigene_synonym BANF1 8815
Homo sapiens Primates p100 P100 ncbigene_synonym CUX1 1523
Homo sapiens Primates p100 P100 ncbigene_synonym OAS3 4940
Homo sapiens Primates p100 P100 ncbigene_synonym PMEL 6490
Homo sapiens Primates p100 P100 ncbigene_synonym SART3 9733
Homo sapiens Primates p100 P100 ncbigene_synonym TPX2 22974
Homo sapiens Primates p100 P100 ncbigene_synonym SND1 27044
Homo sapiens Primates p100 P100 ncbigene_synonym ASCC2 84164
Homo sapiens Primates NIK NIK ncbigene_synonym MAP3K14 9020
Homo sapiens Primates NIK NIK ncbigene_synonym MAP4K4 9448
Homo sapiens Primates RANK/ RANK ncbigene_synonym TNFRSF11A 8792
Rattus norvegicus Rodents TNF-a TNF-A ncbigene_synonym Tnf 24835
Rattus norvegicus Rodents p65 P65 ncbigene_synonym Syt1 25716
Rattus norvegicus Rodents CD40L CD40L ncbigene_synonym Cd40lg 84349
Rattus norvegicus Rodents RelB RELB ncbigene_symbol Relb 100360982
Rattus norvegicus Rodents BAF BAF ncbigene_synonym Banf1 114087
Rattus norvegicus Rodents IKKa IKKA ncbigene_synonym Chuk 309361
Rattus norvegicus Rodents RANK/ RANK ncbigene_synonym Tnfrsf11a 498206
Drosophila melanogaster Invertebrates TNF-a TNF-A ncbigene_synonym egr 36054
Drosophila melanogaster Invertebrates IKKY IKKG ncbigene_synonym key 37967
Drosophila melanogaster Invertebrates IL-1/ IL-1 ncbigene_synonym JIL-1 39241
Drosophila melanogaster Invertebrates p65 P65 ncbigene_synonym dl 35047
Drosophila melanogaster Invertebrates p65 P65 ncbigene_synonym wash 36311
Drosophila melanogaster Invertebrates p50 P50 ncbigene_synonym Hrb27C 33968
Drosophila melanogaster Invertebrates p50 P50 ncbigene_synonym betaTub60D 37888
Drosophila melanogaster Invertebrates p50 P50 ncbigene_synonym Rpt5 42805
Drosophila melanogaster Invertebrates p50 P50 ncbigene_synonym DCTN2-p50 44086
Drosophila melanogaster Invertebrates IKK IKK ncbigene_synonym IKKepsilon 35329
Drosophila melanogaster Invertebrates IKK IKK ncbigene_synonym IKKbeta 44432
Drosophila melanogaster Invertebrates p52 P52 ncbigene_synonym mrn 39688
Drosophila melanogaster Invertebrates BAF BAF ncbigene_symbol baf 34095
Drosophila melanogaster Invertebrates p100 P100 ncbigene_synonym Tudor-SN 38045
Drosophila melanogaster Invertebrates p100 P100 ncbigene_synonym Pep 45961
Drosophila melanogaster Invertebrates NIK NIK ncbigene_symbol Ni-K 252004
Drosophila melanogaster Invertebrates NIK NIK ncbigene_synonym msn 44030

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID