Classical pathway of glycogen metabolism in prokaryotes

Classical pathway of glycogen metabolism in prokaryotes. Pgm converts glucose-6-phosphate into glucose-1-phosphate, which serves as a substrate for ADP-glucose synthesis catalyzed by glucose-1-phosphate adenylyltransferase (GlgCD) encoded by glgC and glgD genes. Then, GlgA catalyzes the transfer of glucosyl moieties from ADP-glucose to the elongating chain of linear α-1,4-glucan; GlgB subsequently cleaves off a portion of the glucan and attaches it to existing chains via α-1,6 linkages to form the glycogen structure. For glycogen degradation, GlgP sequentially releases glucose moieties from the non-reducing ends to form glucose-1-phosphate and α-1,6-branched dextrins. GlgX or Amy hydrolyzes the α-1,6 branches of the phosphorylase-limit dextrins (typically 3–5 glucosyl residues in length) leading to the release of maltodextrins. Glycogen biosynthetic steps are indicated in red arrows, whereas glycogen degradation pathway is indicated in dashed purple arrows.
Classical pathway of glycogen metabolism in prokaryotes

Publication

Insights into glycogen metabolism in Lactobacillus acidophilus: impact on carbohydrate metabolism, stress tolerance and gut retention. (2014) Yong Jun Goh, et al. Microb Cell Fact. 2014;13:94. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates Pgm PGM ncbigene_synonym VCAN 1462
Homo sapiens Primates a-1,4-glucan A1 ncbigene_synonym ADRA1D 146
Homo sapiens Primates Amy AMY ncbigene_synonym OLFM1 10439
Homo sapiens Primates Amy AMY ncbigene_synonym COL25A1 84570
Homo sapiens Primates a-1,4 A-4 ncbigene_synonym IGBP1 3476
Homo sapiens Primates a-1,6 A16 ncbigene_synonym IGKV3-31 28910
Escherichia coli str. K-12 substr. MG1655 Bacteria Pgm PGM ncbigene_symbol pgm 945271
Escherichia coli str. K-12 substr. MG1655 Bacteria GlgA GLGA ncbigene_symbol glgA 947932
Escherichia coli str. K-12 substr. MG1655 Bacteria GlgX GLGX ncbigene_symbol glgX 947941
Escherichia coli str. K-12 substr. MG1655 Bacteria GlgB GLGB ncbigene_symbol glgB 947940

Chemical mentions

Word Match MeSH Name ChEBI
glucose-1-phosphate NA mesh:C031590
ADP-glucose Adenosine Diphosphate Glucose mesh:D000245 ADP alpha-D-glucoside chebi:15751
glucose Glucose mesh:D005947 D-glucopyranose chebi:4167
glucose-6-phosphate NA mesh:D019298

Disease mentions

Word Match MeSH Name DOID