Sphingolipid metabolism
Sphingolipid metabolism. Ceramide is the centerpiece of the sphingolipid metabolic pathway and can be synthesized de novo from l-serine and palmitoyl-CoA (green), through hydrolysis of sphingomyelin (yellow), or through hydrolysis of glycosphingolipids and sulfatites (purple). Ceramide can also be synthesized from sphingomyelin through the action of sphingomyelinases, or from ceramide-1-phosphate through the action of ceramide-1-phosphate phosphatase. Finally, ceramide can be further catabolized (blue) to sphingosine and sphingosine-1-phosphate, which are biologically active metabolites and finally to ethanolamine-1-phosphate and C16 fatty aldehydes. SPT, serine palmitoyl transferase; 3-KSR, 3-ketosphinganine reductase; CS, ceramide synthetase; DES, dihydroceramide desaturase; SMase, sphingomyelinase; SMS, sphingomyelin synthetase; PC, phosphatidylcholine; DAG, diacylglycerol; C1PPase, ceramide-1-phosphate phosphatase; CK, ceramide kinase; CDase, ceramidase; CS, ceramide synthase; SK, spingosine kinase; S1PP, spingosine-1-phosphate phosphatase; GCS, glycosylceramide synthase; GCase, glycosylceramidase; GalCS, galactosylceramide synthase; Gal-CDase, galactosylceramidase.
Publication
Podocyte Pathology and Nephropathy – Sphingolipids in Glomerular Diseases. (2014) Sandra Merscher, et al. Front Endocrinol (Lausanne). 2014;5:127. Figure: F2.| Organism | Group | Word | Match | Source | NCBI Symbol | NCBI ID |
|---|---|---|---|---|---|---|
| Sus scrofa | Mammals | CS | CS | ncbigene_symbol | CS | 397519 |
| Sus scrofa | Mammals | PC | PC | ncbigene_symbol | PC | 397630 |
| Sus scrofa | Mammals | SMS | SMS | ncbigene_symbol | SMS | 100153052 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 407424 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100323015 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100323052 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100323080 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100324280 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100324296 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100325444 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100325848 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100326839 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100326840 |
| Sus scrofa | Mammals | CK | CK | ncbigene_symbol | CK | 100327012 |
| Sus scrofa | Mammals | DES | DES | ncbigene_symbol | DES | 396725 |
| Sus scrofa | Mammals | GCS | GCS | ncbigene_synonym | GSC | 397342 |
| Mus musculus | Rodents | SPT | SPT | ncbigene_symbol | Spt | 111363 |
| Mus musculus | Rodents | SPT | SPT | ncbigene_synonym | Agxt | 11611 |
| Mus musculus | Rodents | CS | CS | ncbigene_symbol | Cs | 12974 |
| Mus musculus | Rodents | PC | PC | ncbigene_symbol | pc | 18517 |
| Mus musculus | Rodents | SMS | SMS | ncbigene_symbol | Sms | 20603 |
| Mus musculus | Rodents | SMS | SMS | ncbigene_synonym | Sms-ps | 671878 |
| Mus musculus | Rodents | DES | DES | ncbigene_symbol | Des | 13346 |
| Mus musculus | Rodents | GCase | GCASE | ncbigene_synonym | Gba1 | 14466 |
| Mus musculus | Rodents | sIT | SIT | ncbigene_synonym | Sit1 | 54390 |
| Mus musculus | Rodents | S1P | S1P | ncbigene_synonym | S1pr1 | 13609 |
| Mus musculus | Rodents | S1P | S1P | ncbigene_synonym | Mbtps1 | 56453 |
| Mus musculus | Rodents | GM2, | GM2 | ncbigene_synonym | Cyb5d2 | 192986 |
| Mus musculus | Rodents | GM3) | GM3 | ncbigene_synonym | Grm6 | 108072 |
| Mus musculus | Rodents | GM3) | GM3 | ncbigene_synonym | Gma3 | 110204 |
| Homo sapiens | Primates | SPT | SPT | ncbigene_synonym | AGXT | 189 |
| Homo sapiens | Primates | CS | CS | ncbigene_symbol | CS | 1431 |
| Homo sapiens | Primates | PC | PC | ncbigene_symbol | PC | 5091 |
| Homo sapiens | Primates | SMS | SMS | ncbigene_symbol | SMS | 6611 |
| Homo sapiens | Primates | SMS | SMS | ncbigene_synonym | RAI1 | 10743 |
| Homo sapiens | Primates | DES | DES | ncbigene_symbol | DES | 1674 |
| Homo sapiens | Primates | GCS | GCS | ncbigene_synonym | GCLC | 2729 |
| Homo sapiens | Primates | GCS | GCS | ncbigene_synonym | UGCG | 7357 |
| Homo sapiens | Primates | sIT | SIT | ncbigene_synonym | SIT1 | 27240 |
| Homo sapiens | Primates | S1P | S1P | ncbigene_synonym | MBTPS1 | 8720 |
| Homo sapiens | Primates | (GD3, | GD3 | ncbigene_synonym | GRDX | 117189 |
| Rattus norvegicus | Rodents | SPT | SPT | ncbigene_synonym | Agxt | 24792 |
| Rattus norvegicus | Rodents | CS | CS | ncbigene_symbol | Cs | 170587 |
| Rattus norvegicus | Rodents | PC | PC | ncbigene_symbol | Pc | 25104 |
| Rattus norvegicus | Rodents | SMS | SMS | ncbigene_symbol | Sms | 363469 |
| Rattus norvegicus | Rodents | DES | DES | ncbigene_symbol | Des | 64362 |
| Rattus norvegicus | Rodents | S1P | S1P | ncbigene_synonym | Mbtps1 | 89842 |
| Rattus norvegicus | Rodents | (Gb3) | GB3 | ncbigene_synonym | A4galt | 63888 |
| Drosophila melanogaster | Invertebrates | De | DE | ncbigene_symbol | de | 248301 |
| Drosophila melanogaster | Invertebrates | SPT | SPT | ncbigene_symbol | Spt | 35889 |
| Drosophila melanogaster | Invertebrates | SPT | SPT | ncbigene_synonym | lace | 34910 |
| Drosophila melanogaster | Invertebrates | SPT | SPT | ncbigene_synonym | en | 36240 |
| Drosophila melanogaster | Invertebrates | SPT | SPT | ncbigene_synonym | Spt-I | 36448 |
| Drosophila melanogaster | Invertebrates | SPT | SPT | ncbigene_synonym | srp | 41944 |
| Drosophila melanogaster | Invertebrates | CS | CS | ncbigene_symbol | cs | 248200 |
| Drosophila melanogaster | Invertebrates | PC | PC | ncbigene_symbol | Pc | 40358 |
| Drosophila melanogaster | Invertebrates | SMS | SMS | ncbigene_symbol | Sms | 39403 |
| Drosophila melanogaster | Invertebrates | SMS | SMS | ncbigene_synonym | stumps | 41770 |
| Drosophila melanogaster | Invertebrates | CK | CK | ncbigene_symbol | ck | 34882 |
| Drosophila melanogaster | Invertebrates | DES | DES | ncbigene_synonym | ifc | 33836 |
| Drosophila melanogaster | Invertebrates | SMase | SMASE | ncbigene_synonym | CG32052 | 326184 |
| Drosophila melanogaster | Invertebrates | GCS | GCS | ncbigene_synonym | Gclc | 53581 |
| Drosophila melanogaster | Invertebrates | CDase | CDASE | ncbigene_symbol | CDase | 43618 |
| Drosophila melanogaster | Invertebrates | sIT | SIT | ncbigene_symbol | sit | 42658 |
| Drosophila melanogaster | Invertebrates | sIT | SIT | ncbigene_synonym | rasp | 44098 |
| Drosophila melanogaster | Invertebrates | S1P | S1P | ncbigene_symbol | S1P | 40399 |
| Drosophila melanogaster | Invertebrates | (Gb3) | GB3 | ncbigene_synonym | GABA-B-R3 | 33248 |
| Word | Match | MeSH | Name | ChEBI |
|---|---|---|---|---|
| C16 fatty aldehyde | fatty aldehyde | mesh:C001634 | fatty aldehyde | chebi:35746 |
| 3-Ketosphinganine | NA | mesh:C002882 | ||
| Sphinganine | NA | mesh:C005682 | ||
| Lactosides | NA | mesh:C008245 | ||
| Sphingosine-1-phosphate | sphingosine 1-phosphate | mesh:C060506 | sphingosine 1-phosphate | chebi:37550 |
| Ceramide-1-phosphate | NA | mesh:C065576 | ||
| Dihydroceramide | NA | mesh:C109343 | ||
| Ceramide | Ceramides | mesh:D002518 | ceramide | chebi:17761 |
| Galactosylceramide | Galactosylceramides | mesh:D005699 | galactosylceramide | chebi:36498 |
| Gangliosides | Gangliosides | mesh:D005732 | ganglioside | chebi:28892 |
| Globosides | Globosides | mesh:D005915 | globoside | chebi:61360 |
| Glucosylceramide | D-glucosyl-N-acylsphingosine | mesh:D005963 | Glucosylceramides | chebi:18368 |
| Lactosylceramide | Lactosylceramides | mesh:D007790 | beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1)-N-acylsphingosine | chebi:17950 |
| L-Serine | Serine | mesh:D012694 | L-serine | chebi:17115 |
| Sphingomyelin | NA | mesh:D013109 | ||
| Sphingosine | Sphingosine | mesh:D013110 | sphingosine | chebi:16393 |
| Sulfatides | Sulfoglycosphingolipids | mesh:D013433 | sulfoglycosphingolipid | chebi:36477 |
Disease mentions
| Word | Match | MeSH | Name | DOID |
|---|