Cell-signaling pathways from the UPR to autophagy and ER stress-induced apoptosis
Cell-signaling pathways from the UPR to autophagy and ER stress-induced apoptosis. Conditions of ER stress where unfolded or misfolded proteins build up cause GRP78 to release three major ER stress sensors on the ER membrane: PERK, ATF6, and IRE1, which are then activated. Upon release from GRP78, IRE1 oligomerizes, autophosphorylates, and processes XBP1 mRNA to produce an active transcription factor, spliced XBP1 (sXBP1). sXBP1 activates stress-inducible genes involved in protein folding and protein degradation, including the genes ER degradation-enhancing alpha-mannosidase-like protein (EDEM), protein disulphide isomerase (PDI), and X box-binding protein 1 (XBP1). Active ATF6 translocates to the nucleus and induces the expression of genes with ER response elements in their promoters, including CHOP and XBP1. Activated PERK dimerizes and autophosphorylates itself. Activated PERK phosphorylates and inactivates eIF2α, which suppresses global cap-dependent mRNA translation, but activates ATF4 translation. ATF4 translocates to the nucleus and induces the transcription of genes for amino acid metabolism, redox reactions, CHOP, and GADD34. These responses reduce the unfolded protein load in the ER by reducing the global protein synthesis, by increasing the folding capacity of the ER and by removing misfolded proteins from the ER. Largely through the two pathways of the UPR, the PERK-eIF2α and IRE1-TRAF2-JNK pathways, ER stressors can induce autophagy (orange arrow). Activation of the PERK-eIF2α axis of the UPR pathways was shown to upregulate Atg12, convert LC3-I to LC3-II, and subsequently facilitate autophagosome formation. Activated IRE1α can recruit tumor-necrosis factor receptor associated factor 2 (TRAF2) and apoptosis-signal regulating kinase (ASK1), subsequently activating JNK. Severe ER stress leads to activation of JNK that downregulates the anti-apoptotic protein Bcl-2 by phosphorylating Bcl-2 on the mitochondrial and ER membrane. JNK-mediated phosphorylation of Bcl-2 releases Beclin1 from its inhibitory interaction with Bcl-2 at ER membrane. Freed Beclin1 induces autophagy through the formation of hVPS34 complexes. The first step of autophagy (induction) is activated by ULK complex composed of ULK1, Atg13, FIP200, and Atg20. The nucleation step is mediated by a complex involving VPS34 (also known as PI3KCIII) with either Beclin1-Atg14L-VPS34-p150 or Beclin1-UVRAG-VPS34-p150. The elongation of the phagophore is mediated by two ubiquitin-like conjugation systems that together promote the assembly of the Atg5-Atg12-Atg16L complex and the processing of LC3. The lipidated form of LC3-I (LC3-II) is attached to both faces of the phagophore membrane. ER stress can induce apoptosis through an intrinsic pathway involving cytochrome c release from mitochondria and caspase activation. Autophagy is also induced via JNK activation that releases Beclin1 from its inhibitory interaction with Bcl-2 at the level of ER, via Bcl-2 phosphorylation. UVRAG, UV radiation resistance associated gene protein; VPS, vacuolar protein sorting; ERAD, ER-associated degradation. Modified and adapted by permission from Nature Publishing Group from Ref. .
Publication
Unfolded protein response to autophagy as a promising druggable target for anticancer therapy. (2012)
Dong Hoon Suh, et al. Ann N Y Acad Sci. 2012 Oct;1271(1):20-32. Figure: F1.
All organisms
Mus musculus
Homo sapiens
Cricetulus griseus
Drosophila melanogaster
Organism
Group
Word
Match
Source
NCBI Symbol
NCBI ID
Mus musculus
Rodents
JNK
JNK
ncbigene_synonym
Mapk8
26419
Mus musculus
Rodents
Bax
BAX
ncbigene_symbol
Bax
12028
Mus musculus
Rodents
Bax
BAX
ncbigene_synonym
Nkx3-1
18095
Mus musculus
Rodents
TRAF2
TRAF2
ncbigene_symbol
Traf2
22030
Mus musculus
Rodents
Cap-dependent
CAP
ncbigene_synonym
Sorbs1
20411
Mus musculus
Rodents
Cap-dependent
CAP
ncbigene_synonym
Lnpep
240028
Mus musculus
Rodents
FIP200
FIP200
ncbigene_synonym
Rb1cc1
12421
Mus musculus
Rodents
P150
P150
ncbigene_synonym
Dctn1
13191
Mus musculus
Rodents
P150
P150
ncbigene_synonym
Anpep
16790
Mus musculus
Rodents
P150
P150
ncbigene_synonym
Chaf1a
27221
Mus musculus
Rodents
P150
P150
ncbigene_synonym
Pik3r4
75669
Mus musculus
Rodents
P150
P150
ncbigene_synonym
Akap5
238276
Mus musculus
Rodents
VPS34
VPS34
ncbigene_synonym
Pik3c3
225326
Mus musculus
Rodents
PS
PS
ncbigene_symbol
Ps
109641
Mus musculus
Rodents
GRP78,EDEMPDI,PSXBP1,
GRP78
ncbigene_synonym
Hspa5
14828
Mus musculus
Rodents
EDEM
EDEM
ncbigene_synonym
Edem1
192193
Mus musculus
Rodents
XBP1,
XBP1
ncbigene_symbol
Xbp1
22433
Mus musculus
Rodents
PDI,
PDI
ncbigene_synonym
Pdia3
14827
Mus musculus
Rodents
PDI,
PDI
ncbigene_synonym
P4hb
18453
Mus musculus
Rodents
PDI,
PDI
ncbigene_synonym
Padi2
18600
Mus musculus
Rodents
GADD34.
GADD34
ncbigene_synonym
Ppp1r15a
17872
Mus musculus
Rodents
CHOP,GADD34.
CHOP
ncbigene_synonym
Ddit3
13198
Mus musculus
Rodents
Ag1
AG1
ncbigene_synonym
Dmp1
13406
Mus musculus
Rodents
Aga
AGA
ncbigene_symbol
Aga
11593
Mus musculus
Rodents
LCa
LCA
ncbigene_synonym
Clta
12757
Mus musculus
Rodents
LCa
LCA
ncbigene_synonym
Ptprc
19264
Homo sapiens
Primates
JNK
JNK
ncbigene_synonym
MAPK8
5599
Homo sapiens
Primates
JNK
JNK
famplex_relations
MAPK9
5601
Homo sapiens
Primates
JNK
JNK
famplex_relations
MAPK10
5602
Homo sapiens
Primates
Bax
BAX
ncbigene_symbol
BAX
581
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMA1
5682
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMA2
5683
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMA3
5684
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMA4
5685
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMA5
5686
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMA6
5687
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMA7
5688
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMA8
143471
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB1
5689
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB10
5699
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB2
5690
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB3
5691
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB4
5692
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB5
5693
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB6
5694
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB7
5695
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB8
5696
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMB9
5698
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMC1
5700
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMC2
5701
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMC3
5702
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMC4
5704
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMC5
5705
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMC6
5706
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD1
5707
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD10
5716
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD11
5717
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD12
5718
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD13
5719
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD14
10213
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD2
5708
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD3
5709
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD4
5710
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD5
5711
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD6
9861
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD7
5713
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD8
5714
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMD9
5715
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSME1
5720
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSME2
5721
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSME3
10197
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
PSMF1
9491
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
SEM1
7979
Homo sapiens
Primates
Proteasome
PROTEASOME
famplex_relations
USP5
8078
Homo sapiens
Primates
TRAF2
TRAF2
ncbigene_symbol
TRAF2
7186
Homo sapiens
Primates
TRAF2
TRAF2
ncbigene_synonym
TANK
10010
Homo sapiens
Primates
Cap-dependent
CAP
ncbigene_synonym
CTAA1
1483
Homo sapiens
Primates
Cap-dependent
CAP
ncbigene_synonym
LNPEP
4012
Homo sapiens
Primates
Cap-dependent
CAP
ncbigene_synonym
SERPINB6
5269
Homo sapiens
Primates
Cap-dependent
CAP
ncbigene_synonym
HACD1
9200
Homo sapiens
Primates
Cap-dependent
CAP
ncbigene_synonym
CAP1
10487
Homo sapiens
Primates
Cap-dependent
CAP
ncbigene_synonym
SORBS1
10580
Homo sapiens
Primates
Cap-dependent
CAP
ncbigene_synonym
BRD4
23476
Homo sapiens
Primates
Cap-dependent
CAP
famplex_relations
CAP2
10486
Homo sapiens
Primates
FIP200
FIP200
ncbigene_synonym
RB1CC1
9821
Homo sapiens
Primates
P150
P150
ncbigene_synonym
ABL1
25
Homo sapiens
Primates
P150
P150
ncbigene_synonym
ANPEP
290
Homo sapiens
Primates
P150
P150
ncbigene_synonym
CTR9
9646
Homo sapiens
Primates
P150
P150
ncbigene_synonym
CHAF1A
10036
Homo sapiens
Primates
P150
P150
ncbigene_synonym
RAB3GAP2
25782
Homo sapiens
Primates
P150
P150
ncbigene_synonym
PIK3R4
30849
Homo sapiens
Primates
VPS4
VPS4
ncbigene_synonym
VPS4A
27183
Homo sapiens
Primates
VPS34
VPS34
ncbigene_synonym
PIK3C3
5289
Homo sapiens
Primates
GRP78,EDEMPDI,PSXBP1,
GRP78
ncbigene_synonym
HSPA5
3309
Homo sapiens
Primates
EDEM
EDEM
ncbigene_synonym
EDEM1
9695
Homo sapiens
Primates
XBP1,
XBP1
ncbigene_symbol
XBP1
7494
Homo sapiens
Primates
XBP1,
XBP1
ncbigene_synonym
XBP1P1
7495
Homo sapiens
Primates
PDI,
PDI
ncbigene_synonym
P4HB
5034
Homo sapiens
Primates
PDI,
PDI
ncbigene_synonym
PADI1
29943
Homo sapiens
Primates
PDI,
PDI
ncbigene_synonym
PDIA2
64714
Homo sapiens
Primates
GADD34.
GADD34
ncbigene_synonym
PPP1R15A
23645
Homo sapiens
Primates
CHOP,GADD34.
CHOP
ncbigene_synonym
DDIT3
1649
Homo sapiens
Primates
Ag1
AG1
ncbigene_synonym
TXNDC12
51060
Homo sapiens
Primates
Ag1
AG1
ncbigene_synonym
NBPF10
100132406
Homo sapiens
Primates
Alg1L
ALG1L
ncbigene_synonym
ALG1L1P
200810
Homo sapiens
Primates
Alg1L
AIG1L
ncbigene_synonym
ADTRP
84830
Homo sapiens
Primates
Aga
AGA
ncbigene_symbol
AGA
175
Homo sapiens
Primates
LCa
LCA
ncbigene_synonym
CLTA
1211
Homo sapiens
Primates
LCa
LCA
ncbigene_synonym
GUCY2D
3000
Homo sapiens
Primates
LCa
LCA
ncbigene_synonym
PTPRC
5788
Cricetulus griseus
Rodents
Bax
BAX
ncbigene_symbol
Bax
100689032
Cricetulus griseus
Rodents
TRAF2
TRAF2
ncbigene_symbol
Traf2
100762099
Cricetulus griseus
Rodents
GRP78,EDEMPDI,PSXBP1,
GRP78
ncbigene_synonym
Hspa5
100689305
Cricetulus griseus
Rodents
EDEM
EDEM
ncbigene_synonym
Edem1
100689456
Cricetulus griseus
Rodents
XBP1,
XBP1
ncbigene_symbol
Xbp1
100689062
Cricetulus griseus
Rodents
PDI,
PDI
ncbigene_synonym
P4hb
100689433
Cricetulus griseus
Rodents
Aga
AGA
ncbigene_symbol
Aga
100754017
Drosophila melanogaster
Invertebrates
JNK
JNK
ncbigene_synonym
bsk
44801
Drosophila melanogaster
Invertebrates
TRAF2
TRAF2
ncbigene_synonym
Traf6
31746
Drosophila melanogaster
Invertebrates
SXBP1
SXBP1
ncbigene_synonym
Xbp1
44226
Drosophila melanogaster
Invertebrates
Cap-dependent
CAP
ncbigene_symbol
CAP
36084
Drosophila melanogaster
Invertebrates
Cap-dependent
CAP
ncbigene_synonym
SMC3
32627
Drosophila melanogaster
Invertebrates
Cap-dependent
CAP
ncbigene_synonym
Cpn
41474
Drosophila melanogaster
Invertebrates
Cap-dependent
CAP
ncbigene_synonym
Capa
43541
Drosophila melanogaster
Invertebrates
Cap-dependent
CAP
ncbigene_synonym
capt
45233
Drosophila melanogaster
Invertebrates
Cap-dependent
CAP
ncbigene_synonym
bel
45826
Drosophila melanogaster
Invertebrates
Cap-dependent
CAP
ncbigene_synonym
SERCA
49297
Drosophila melanogaster
Invertebrates
Cap-dependent
CAP
ncbigene_synonym
Cadps
49968
Drosophila melanogaster
Invertebrates
FIP200
FIP200
ncbigene_synonym
Atg17
40700
Drosophila melanogaster
Invertebrates
P150
P150
ncbigene_synonym
Gp150
37549
Drosophila melanogaster
Invertebrates
P150
P150
ncbigene_synonym
DCTN1-p150
39536
Drosophila melanogaster
Invertebrates
P150
P150
ncbigene_synonym
Vps15
41096
Drosophila melanogaster
Invertebrates
VPS4
VPS4
ncbigene_symbol
Vps4
32777
Drosophila melanogaster
Invertebrates
VPS34
VPS34
ncbigene_synonym
Pi3K59F
37733
Drosophila melanogaster
Invertebrates
PS
PS
ncbigene_symbol
ps
44258
Drosophila melanogaster
Invertebrates
GRP78,EDEMPDI,PSXBP1,
GRP78
ncbigene_synonym
Hsc70-3
32133
Drosophila melanogaster
Invertebrates
GRP78,EDEMPDI,PSXBP1,
GRP78
ncbigene_synonym
Hsp70Ab
44920
Drosophila melanogaster
Invertebrates
PDI,
PDI
ncbigene_symbol
Pdi
39651
Drosophila melanogaster
Invertebrates
GADD34.
GADD34
ncbigene_synonym
PPP1R15
37820
Drosophila melanogaster
Invertebrates
Ag1
AG1
ncbigene_synonym
ArfGAP1
39417
Drosophila melanogaster
Invertebrates
Atgs
ATG
ncbigene_synonym
Atg1
39454
Drosophila melanogaster
Invertebrates
Atgs
ATG
ncbigene_synonym
squ
2768920
Drosophila melanogaster
Invertebrates
Aga
AGA
ncbigene_synonym
tRNA:Arg-TCT-3-1
3771849
Drosophila melanogaster
Invertebrates
Aga
AGA
ncbigene_synonym
tRNA:Arg-TCT-2-1
3772425
Drosophila melanogaster
Invertebrates
Aga
AGA
ncbigene_synonym
tRNA:Arg-TCT-1-1
3772498
Drosophila melanogaster
Invertebrates
LOS
LOS
ncbigene_synonym
mid
33770
Word
Match
MeSH
Name
ChEBI
Disease mentions
Word
Match
MeSH
Name
DOID