Proposed working model and protein–protein interaction map

Proposed working model and protein–protein interaction map. (A) Working model. In the absence of growth factors (top left), Gαi3 preferentially interacts with AGS3, its GDI, which maintains it inactive (Gαi3–GDP). The Gαi3–AGS3 complex localizes to LC3-positive structures via a direct interaction between AGS3 and LC3, thereby promoting autophagy (i.e., maturation of preautophagosomal structures into mature LC3-positive structures; green panel, bottom). In the presence of growth factors (top panel, right), Gαi3 is activated (Gαi3–GTP) by GIV, its GEF, which 1) enhances the anti-autophagic class I PI3K-Akt-mTOR signaling pathway at the PM and 2) releases active Gαi3 from Gαi3–AGS3–LC3 complexes assembled on membranes, thereby directly inhibiting autophagosome formation and maturation. It is possible that signaling programs modulated by GIV’s GEF function at the PM also influence the equilibrium between Gαi3–AGS3 and Gαi3–GIV as a regulatory feedback loop (interrupted arrow). Further studies will be required to pinpoint the specific LC3-positive compartment where Gαi3 localizes and the precise role of this G protein in regulating autophagosome maturation. (B) Proposed protein–protein interaction map for Gαi3, GIV, and AGS3 showing the shortest functional links that integrate pro- or anti-autophagic signaling by growth factors and G protein pathways in balancing the process (initiation and reversal) of autophagy. Functional interactions between Gαi3 and its modulators analyzed in this (GIV and AGS3) and other studies (RGS19/GAIP; Ogier-Denis et al., ) in the context of autophagy are shown. These are based on interactions listed in the I2D (Brown and Jurisica, ; Brown et al., ), STRING (http://string-db.org/), and MitoCheck (www.mitocheck.org) databases and validated in the literature. For simplicity, this interaction map includes only the experimentally validated functional interactions that are relevant to G protein and growth factor signaling during autophagy. The proteins of the autophagic pathway (green) are linked to Gαi3 by a direct interaction (identified in this work and highlighted with a bold red line) between the GDI AGS3 (GPSM1) and LC3 (ATG8). The proteins of the anti-autophagic growth factor/nutrients (growth factor receptors, G protein–coupled receptors) and mTOR signaling pathways (red) are linked to G protein signaling via GIV (Girdin), the GEF that directly interacts with and activates Gαi3 (resulting in Gαi3–GTP). The protein network also reveals that processes such as apoptosis (blue) and asymmetric cell division (yellow) are likely to be influenced by modulation of G protein activity by either this or other such pairs of GDI(s) and GEF(s).
Proposed working model and protein–protein interaction map

Publication

A GDI (AGS3) and a GEF (GIV) regulate autophagy by balancing G protein activity and growth factor signals. (2011) Mikel Garcia-Marcos, et al. Mol Biol Cell. 2011 Mar 1;22(5):673-686. Figure: F7.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates m-TOR MTOR ncbigene_symbol MTOR 2475
Homo sapiens Primates РІЗК-Akt AKT ncbigene_synonym AKT1 207
Homo sapiens Primates РІЗК-Akt AKT famplex_relations AKT2 208
Homo sapiens Primates РІЗК-Akt AKT famplex_relations AKT3 10000
Homo sapiens Primates LC3- LC3 ncbigene_synonym MAP1LC3A 84557
Homo sapiens Primates AGS3 AGS3 ncbigene_synonym GPSM1 26086
Homo sapiens Primates AGS3 AGS3 ncbigene_synonym RNASEH2C 84153
Homo sapiens Primates NDEL1 NDEL1 ncbigene_symbol NDEL1 81565
Homo sapiens Primates DISC1 DISC1 ncbigene_symbol DISC1 27185
Homo sapiens Primates GNAI1 GNAI1 ncbigene_symbol GNAI1 2770
Homo sapiens Primates Actin ACTIN famplex_relations ACTA1 58
Homo sapiens Primates Actin ACTIN famplex_relations ACTA2 59
Homo sapiens Primates Actin ACTIN famplex_relations ACTB 60
Homo sapiens Primates Actin ACTIN famplex_relations ACTC1 70
Homo sapiens Primates Actin ACTIN famplex_relations ACTG1 71
Homo sapiens Primates Actin ACTIN famplex_relations ACTG2 72
Homo sapiens Primates GNAI2 GNAI2 ncbigene_symbol GNAI2 2771
Homo sapiens Primates INSC INSC ncbigene_symbol INSC 387755
Homo sapiens Primates KIF15 KIF15 ncbigene_symbol KIF15 56992
Homo sapiens Primates EGFR EGFR ncbigene_symbol EGFR 1956
Homo sapiens Primates IGFR1 IGFR1 ncbigene_synonym FCGR1A 2209
Homo sapiens Primates IGFR1 IGFR1 ncbigene_synonym FCGR1BP 2210
Homo sapiens Primates IGFR1 IGFR1 ncbigene_synonym FCGR1CP 100132417
Homo sapiens Primates VEGFR VEGFR ncbigene_synonym KDR 3791
Homo sapiens Primates VEGFR VEGFR famplex_relations FLT1 2321
Homo sapiens Primates VEGFR VEGFR famplex_relations FLT4 2324
Homo sapiens Primates CENPE CENPE ncbigene_symbol CENPE 1062
Homo sapiens Primates GNAI3 GNAI3 ncbigene_symbol GNAI3 2773
Homo sapiens Primates XRCC3 XRCC3 ncbigene_symbol XRCC3 7517
Homo sapiens Primates GIRDIN GIRDIN ncbigene_synonym CCDC88A 55704
Homo sapiens Primates LPAR LPAR famplex_relations LPAR1 1902
Homo sapiens Primates LPAR LPAR famplex_relations LPAR2 9170
Homo sapiens Primates LPAR LPAR famplex_relations LPAR3 23566
Homo sapiens Primates MAPK1 MAPK1 ncbigene_symbol MAPK1 5594
Homo sapiens Primates MAP1B, MAP1B ncbigene_symbol MAP1B 4131
Homo sapiens Primates LKB1 LKB1 ncbigene_synonym STK11 6794
Homo sapiens Primates NBR1 NBR1 ncbigene_symbol NBR1 4077
Homo sapiens Primates DAPK1 DAPK1 ncbigene_symbol DAPK1 1612
Homo sapiens Primates ATG3 ATG3 ncbigene_symbol ATG3 64422
Homo sapiens Primates ATG4B ATG4B ncbigene_symbol ATG4B 23192
Homo sapiens Primates WDFY3 WDFY3 ncbigene_symbol WDFY3 23001
Homo sapiens Primates TP53 TP53 ncbigene_symbol TP53 7157
Homo sapiens Primates PTEN PTEN ncbigene_symbol PTEN 5728
Homo sapiens Primates RGS19/ RGS19 ncbigene_symbol RGS19 10287
Homo sapiens Primates ATG7 ATG7 ncbigene_symbol ATG7 10533
Homo sapiens Primates AMPKa AMPKA famplex_relations PRKAA1 5562
Homo sapiens Primates AMPKa AMPKA famplex_relations PRKAA2 5563
Homo sapiens Primates ATG5 ATG5 ncbigene_symbol ATG5 9474
Homo sapiens Primates ATG8 ATG8 ncbigene_synonym GABARAPL2 11345
Homo sapiens Primates ATG8 ATG8 ncbigene_synonym GABARAPL1 23710
Homo sapiens Primates ATG10 ATG10 ncbigene_symbol ATG10 83734
Homo sapiens Primates PARP1 PARP1 ncbigene_symbol PARP1 142
Homo sapiens Primates PIКЗС3 PI3 ncbigene_symbol PI3 5266
Homo sapiens Primates BCL2 BCL2 ncbigene_symbol BCL2 596
Homo sapiens Primates TSC2 TSC2 ncbigene_symbol TSC2 7249
Homo sapiens Primates BAX BAX ncbigene_symbol BAX 581
Homo sapiens Primates BAK1 BAK1 ncbigene_symbol BAK1 578
Homo sapiens Primates BIF1 BIF1 ncbigene_synonym ZBTB24 9841
Homo sapiens Primates BIF1 BIF1 ncbigene_synonym SH3GLB1 51100
Homo sapiens Primates UVRAG UVRAG ncbigene_symbol UVRAG 7405

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID
Cancer NA