Apoptosis pathway

The apoptosis pathway. Apoptosis is activated by intrinsic and extrinsic pathways. In the intrinsic pathway, certain apoptotic stimuli alter the normal status of the Bcl-2 family of proteins (), which leads to permeabilization of the mitochondrial membrane. Under normal circumstances, the pro-survival proteins of the Bcl-2 family protect the mitochondrial membrane. Once cytochrome c (CytoC) is released into the cytosol, it binds to the apoptosome [], a complex of proteins made up of the apoptosis activating factor-1 (Apaf1) protein and the initiator caspase-9. A morphological change in the apoptosome results from cytochrome c binding, which causes caspase-9 to become activated. Caspase-9 activates the effector caspase-3, leading to apoptosis []. Caspase-3 is known as the ‘executioner caspase’, because it activates or cleaves various protein targets, which is detrimental to the cell and results in death []. Activation of caspase-9 and caspase-3 are normally inhibited by a family of proteins known as the inhibitor of apoptosis proteins (IAPs), and XIAP (X-linked IAP) is the most potent IAP []. In the extrinsic pathway, ligands such as Fas ligand (FasL) or tumor necrosis factor α (TNF-α) bind to death receptors on the membrane of the host cell. Trimerization of the death receptors follows, forming what is known as the death-inducing signaling complex (DISC), which includes the Fas-associated death domain (FADD) adaptor protein, the Flice-like inhibitory protein (FLIP), and procaspase-8 []. Caspase-8 is activated, which in turn directly activates caspase-3 []. In addition, caspase-8 activates the pro-apoptotic protein Bid, which stimulates the intrinsic pathway to enhance the apoptotic signal, because Bid activation eventually leads to cytochrome c release [].
Apoptosis pathway

Publication

Staying alive: bacterial inhibition of apoptosis during infection. () Christina S. Faherty, et al. Trends Microbiol. ;16(4):173-180. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates TNF-a TNF-A ncbigene_synonym TNF 7124
Homo sapiens Primates FasL FASL ncbigene_synonym FASLG 356
Homo sapiens Primates Fas FAS ncbigene_symbol FAS 355
Homo sapiens Primates Fas FAS ncbigene_synonym FASN 2194
Homo sapiens Primates FADD FADD ncbigene_symbol FADD 8772
Homo sapiens Primates FLIP FLIP ncbigene_synonym CFLAR 8837
Homo sapiens Primates FLIP FLIP ncbigene_synonym FIRRM 55732
Homo sapiens Primates ВнЗ B3 ncbigene_synonym EEF1B2P2 1934
Homo sapiens Primates ВнЗ B3 ncbigene_synonym BHLHE22 27319
Homo sapiens Primates Bcl-2 BCL-2 ncbigene_synonym BCL2 596
Homo sapiens Primates Bid BID ncbigene_symbol BID 637
Homo sapiens Primates Bak BAK ncbigene_synonym BAK1 578
Homo sapiens Primates Apaf1 APAF1 ncbigene_symbol APAF1 317
Rattus norvegicus Rodents TNF-a TNF-A ncbigene_synonym Tnf 24835
Rattus norvegicus Rodents FasL FASL ncbigene_synonym Faslg 25385
Rattus norvegicus Rodents Fas FAS ncbigene_symbol Fas 246097
Rattus norvegicus Rodents The THE ncbigene_synonym Th 25085
Rattus norvegicus Rodents Bcl-xL BCL-XL ncbigene_synonym Bcl2l1 24888
Rattus norvegicus Rodents FADD FADD ncbigene_symbol Fadd 266610
Rattus norvegicus Rodents FLIP FLIP ncbigene_synonym Cflar 117279
Rattus norvegicus Rodents FLIP FLIP ncbigene_synonym Firrm 498265
Rattus norvegicus Rodents Bcl-2 BCL-2 ncbigene_synonym Bcl2 24224
Rattus norvegicus Rodents Bid BID ncbigene_symbol Bid 64625
Rattus norvegicus Rodents Bak BAK ncbigene_synonym Bak1 116502
Rattus norvegicus Rodents Apaf1 APAF1 ncbigene_symbol Apaf1 78963
Danio rerio Vertebrates TNF-a TNF-A ncbigene_synonym tnfb 554167
Danio rerio Vertebrates FasL FASL ncbigene_synonym faslg 735295
Danio rerio Vertebrates Fas FAS ncbigene_symbol fas 768248
Danio rerio Vertebrates FADD FADD ncbigene_symbol fadd 562317
Danio rerio Vertebrates FLIP FLIP ncbigene_synonym cflara 373114
Danio rerio Vertebrates FLIP FLIP ncbigene_synonym firrm 553598
Danio rerio Vertebrates Caspase-8 CASPASE-8 ncbigene_synonym casp8 58022
Danio rerio Vertebrates Bcl-2 BC2 ncbigene_synonym chmp2a 798901
Danio rerio Vertebrates Bid BID ncbigene_synonym bida 559425
Danio rerio Vertebrates Apaf1 APAF1 ncbigene_symbol apaf1 58131

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID