Apoptosis pathway
The apoptosis pathway. Apoptosis is activated by intrinsic and extrinsic pathways. In the intrinsic pathway, certain apoptotic stimuli alter the normal status of the Bcl-2 family of proteins (), which leads to permeabilization of the mitochondrial membrane. Under normal circumstances, the pro-survival proteins of the Bcl-2 family protect the mitochondrial membrane. Once cytochrome c (CytoC) is released into the cytosol, it binds to the apoptosome [], a complex of proteins made up of the apoptosis activating factor-1 (Apaf1) protein and the initiator caspase-9. A morphological change in the apoptosome results from cytochrome c binding, which causes caspase-9 to become activated. Caspase-9 activates the effector caspase-3, leading to apoptosis []. Caspase-3 is known as the ‘executioner caspase’, because it activates or cleaves various protein targets, which is detrimental to the cell and results in death []. Activation of caspase-9 and caspase-3 are normally inhibited by a family of proteins known as the inhibitor of apoptosis proteins (IAPs), and XIAP (X-linked IAP) is the most potent IAP []. In the extrinsic pathway, ligands such as Fas ligand (FasL) or tumor necrosis factor α (TNF-α) bind to death receptors on the membrane of the host cell. Trimerization of the death receptors follows, forming what is known as the death-inducing signaling complex (DISC), which includes the Fas-associated death domain (FADD) adaptor protein, the Flice-like inhibitory protein (FLIP), and procaspase-8 []. Caspase-8 is activated, which in turn directly activates caspase-3 []. In addition, caspase-8 activates the pro-apoptotic protein Bid, which stimulates the intrinsic pathway to enhance the apoptotic signal, because Bid activation eventually leads to cytochrome c release [].

Publication
Staying alive: bacterial inhibition of apoptosis during infection. () Christina S. Faherty, et al. Trends Microbiol. ;16(4):173-180. Figure: F1.Organism | Group | Word | Match | Source | NCBI Symbol | NCBI ID |
---|---|---|---|---|---|---|
Homo sapiens | Primates | TNF-a | TNF-A | ncbigene_synonym | TNF | 7124 |
Homo sapiens | Primates | FasL | FASL | ncbigene_synonym | FASLG | 356 |
Homo sapiens | Primates | Fas | FAS | ncbigene_symbol | FAS | 355 |
Homo sapiens | Primates | Fas | FAS | ncbigene_synonym | FASN | 2194 |
Homo sapiens | Primates | FADD | FADD | ncbigene_symbol | FADD | 8772 |
Homo sapiens | Primates | FLIP | FLIP | ncbigene_synonym | CFLAR | 8837 |
Homo sapiens | Primates | FLIP | FLIP | ncbigene_synonym | FIRRM | 55732 |
Homo sapiens | Primates | ВнЗ | B3 | ncbigene_synonym | EEF1B2P2 | 1934 |
Homo sapiens | Primates | ВнЗ | B3 | ncbigene_synonym | BHLHE22 | 27319 |
Homo sapiens | Primates | Bcl-2 | BCL-2 | ncbigene_synonym | BCL2 | 596 |
Homo sapiens | Primates | Bid | BID | ncbigene_symbol | BID | 637 |
Homo sapiens | Primates | Bak | BAK | ncbigene_synonym | BAK1 | 578 |
Homo sapiens | Primates | Apaf1 | APAF1 | ncbigene_symbol | APAF1 | 317 |
Rattus norvegicus | Rodents | TNF-a | TNF-A | ncbigene_synonym | Tnf | 24835 |
Rattus norvegicus | Rodents | FasL | FASL | ncbigene_synonym | Faslg | 25385 |
Rattus norvegicus | Rodents | Fas | FAS | ncbigene_symbol | Fas | 246097 |
Rattus norvegicus | Rodents | The | THE | ncbigene_synonym | Th | 25085 |
Rattus norvegicus | Rodents | Bcl-xL | BCL-XL | ncbigene_synonym | Bcl2l1 | 24888 |
Rattus norvegicus | Rodents | FADD | FADD | ncbigene_symbol | Fadd | 266610 |
Rattus norvegicus | Rodents | FLIP | FLIP | ncbigene_synonym | Cflar | 117279 |
Rattus norvegicus | Rodents | FLIP | FLIP | ncbigene_synonym | Firrm | 498265 |
Rattus norvegicus | Rodents | Bcl-2 | BCL-2 | ncbigene_synonym | Bcl2 | 24224 |
Rattus norvegicus | Rodents | Bid | BID | ncbigene_symbol | Bid | 64625 |
Rattus norvegicus | Rodents | Bak | BAK | ncbigene_synonym | Bak1 | 116502 |
Rattus norvegicus | Rodents | Apaf1 | APAF1 | ncbigene_symbol | Apaf1 | 78963 |
Danio rerio | Vertebrates | TNF-a | TNF-A | ncbigene_synonym | tnfb | 554167 |
Danio rerio | Vertebrates | FasL | FASL | ncbigene_synonym | faslg | 735295 |
Danio rerio | Vertebrates | Fas | FAS | ncbigene_symbol | fas | 768248 |
Danio rerio | Vertebrates | FADD | FADD | ncbigene_symbol | fadd | 562317 |
Danio rerio | Vertebrates | FLIP | FLIP | ncbigene_synonym | cflara | 373114 |
Danio rerio | Vertebrates | FLIP | FLIP | ncbigene_synonym | firrm | 553598 |
Danio rerio | Vertebrates | Caspase-8 | CASPASE-8 | ncbigene_synonym | casp8 | 58022 |
Danio rerio | Vertebrates | Bcl-2 | BC2 | ncbigene_synonym | chmp2a | 798901 |
Danio rerio | Vertebrates | Bid | BID | ncbigene_synonym | bida | 559425 |
Danio rerio | Vertebrates | Apaf1 | APAF1 | ncbigene_symbol | apaf1 | 58131 |
Word | Match | MeSH | Name | ChEBI |
---|
Disease mentions
Word | Match | MeSH | Name | DOID |
---|