The small nuclear ribonucleoprotein biogenesis pathway

The small nuclear ribonucleoprotein biogenesis pathway. RNA polymerase II transcribes snRNAs as precursors containing an m7G cap and short 3′-end extensions in the nucleus. The cap-binding complex (CBC) binds nascent snRNAs and mediates the recruitment of the phosphorylated adaptor for RNA export (PHAX), exportin 1 (Xpo1) and ras-related nuclear protein GTP (RanGTP) for nuclear export. In the cytoplasm, the seven Sm proteins bind first to the chloride conductance regulatory protein (pICln) and the protein arginine methyltransferase 5 (PRMT5) complex—which symmetrically dimethylates SmB, SmD1 and SmD3—and then to the survival motor neuron (SMN) complex. The SMN complex bound to the Sm proteins interacts with snRNAs and mediates Sm core assembly. Hypermethylation of the 5′ cap of snRNAs by trimethylguanosine synthase 1 (TGS1) occurs after Sm core formation; both the SMN complex and snurportin, which associates with the 5′ cap of snRNAs, then bind to importin-β and mediate snRNP nuclear import. The SMN complex and snRNPs transiently localize to Cajal bodies, in which snRNPs undergo further maturation steps including methylation and pseudo-uridylation by small Cajal body-specific ribonucleoproteins (scaRNPs), before functioning in pre-messenger RNA splicing. Depending on the cell type and developmental stage, the SMN complex also localizes to Gems. snRNP, small nuclear ribonucleoprotein.
The small nuclear ribonucleoprotein biogenesis pathway

Publication

Chaperoning ribonucleoprotein biogenesis in health and disease. (2007) Livio Pellizzoni. EMBO Rep. 2007 Apr;8(4):340-345. Figure: F2.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Drosophila melanogaster Invertebrates Gem GEM ncbigene_symbol gem 36064
Drosophila melanogaster Invertebrates Gem GEM ncbigene_synonym geminin 35563
Drosophila melanogaster Invertebrates Gem GEM ncbigene_synonym dally 39013
Drosophila melanogaster Invertebrates Sm SM ncbigene_symbol sm 37254
Drosophila melanogaster Invertebrates Ran RAN ncbigene_symbol Ran 44072
Drosophila melanogaster Invertebrates Ran RAN ncbigene_synonym RanGAP 35223
Drosophila melanogaster Invertebrates PHAX PHAX ncbigene_symbol Phax 35926
Drosophila melanogaster Invertebrates Xpo1 XPO1 ncbigene_synonym emb 34167
Drosophila melanogaster Invertebrates CBC CBC ncbigene_symbol cbc 36494
Drosophila melanogaster Invertebrates SNRNA SNRNA ncbigene_synonym snRNA:U4:25F 3772678
Drosophila melanogaster Invertebrates SNRNP SNRNP ncbigene_synonym snRNP-U1-70K 33982
Drosophila melanogaster Invertebrates SNRNP SNRNP ncbigene_synonym SmD1 44668
Drosophila melanogaster Invertebrates PRMT5 PRMT5 ncbigene_synonym csul 36809
Drosophila melanogaster Invertebrates TGS1 TGS1 ncbigene_symbol Tgs1 59260
Drosophila melanogaster Invertebrates SMN SMN ncbigene_symbol Smn 39844
Homo sapiens Primates Gem GEM ncbigene_symbol GEM 2669
Homo sapiens Primates Gem GEM ncbigene_synonym GMNN 51053
Homo sapiens Primates Ran RAN ncbigene_symbol RAN 5901
Homo sapiens Primates PHAX PHAX ncbigene_symbol PHAX 51808
Homo sapiens Primates Xpo1 XPO1 ncbigene_symbol XPO1 7514
Homo sapiens Primates SNRNP SNRNP ncbigene_synonym LSM2 57819
Homo sapiens Primates PRMT5 PRMT5 ncbigene_symbol PRMT5 10419
Homo sapiens Primates TGS1 TGS1 ncbigene_symbol TGS1 96764
Homo sapiens Primates TGS1 TGS1 ncbigene_synonym LIN9 286826
Homo sapiens Primates SMN SMN ncbigene_synonym STMN1 3925
Homo sapiens Primates SMN SMN ncbigene_synonym SMN1 6606
Homo sapiens Primates SMN SMN ncbigene_synonym SNRPN 6638

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID