MapMan photosynthesis pathway
The MapMan photosynthesis pathway. The figure illustrates the differential expression of 82 and 20 genes in plants treated with the flash (above) and 60 s (below) treatments, respectively. The number of genes altered by the flash treatment is four times greater than that of the 60 s treatment. This indicates that the photosynthetic apparatus is more profoundly impacted by the flash treatment than by the 60 s treatment. In the case of the flash treatment, 31 and 16 DEGs are associated with PSII and PSI, respectively, while seven and three genes are associated with PSII and PSI, respectively. The genes of photorespiration comprise 12 and four in the flash and 60 s treatments, respectively. The genes that are overexpressed are indicated in red, while those that are underexpressed are indicated in blue
Publication
Comparison of the Effects of UV-C Light in the Form of Flash or Continuous Exposure: A Transcriptomic Analysis on Arabidopsis thaliana L. (2024) Seyed Mehdi Jazayeri, et al. Int J Mol Sci. 2024 Dec;25(24). Figure: F9.| Organism | Group | Word | Match | Source | NCBI Symbol | NCBI ID |
|---|---|---|---|---|---|---|
| Homo sapiens | Primates | Light | LIGHT | ncbigene_synonym | TNFSF14 | 8740 |
| Homo sapiens | Primates | Chl | CHL | ncbigene_synonym | CHRDL1 | 91851 |
| Homo sapiens | Primates | Chl | CHL | ncbigene_synonym | KLHDC8B | 200942 |
| Homo sapiens | Primates | Chl | CH1 | ncbigene_synonym | SUCO | 51430 |
| Homo sapiens | Primates | Cyc | CYC | ncbigene_synonym | CYCS | 54205 |
| Homo sapiens | Primates | PC | PC | ncbigene_symbol | PC | 5091 |
| Homo sapiens | Primates | ADP | ADP | ncbigene_synonym | WDTC1 | 23038 |
| Homo sapiens | Primates | ATP | ATP | ncbigene_synonym | ATP8A2 | 51761 |
| Homo sapiens | Primates | Fdx | FDX | ncbigene_synonym | FDX1 | 2230 |
| Homo sapiens | Primates | NADPH | NADPH | ncbigene_synonym | DECR1 | 1666 |
| Homo sapiens | Primates | GAP | GAP | ncbigene_synonym | RASA1 | 5921 |
| Homo sapiens | Primates | GAP | GAP | ncbigene_synonym | RGS6 | 9628 |
| Word | Match | MeSH | Name | ChEBI |
|---|---|---|---|---|
| photon | photon | photon | chebi:30212 | |
| ATP | ATP | ATP | chebi:30616 | |
| photon | photon | photon | chebi:30212 | |
| Glutamine | GLUTAMINE | L-glutamine | chebi:18050 | |
| NADP | NADP | 2'-O-phosphonoadenosine 5'-{3-[1-(3-carbamoylpyridinio)-1,4-anhydro-D-ribitol-5-yl] dihydrogen diphosphate} | chebi:18009 | |
| NADPH | NADPH | 2'-O-phosphonatoadenosine 5'-{3-[1-(3-carbamoyl-1,4-dihydropyridin-1-yl)-1,4-anhydro-D-ribitol-5-yl] diphosphate} | chebi:57783 | |
| ADP | ADP | L-alanyl-L-alpha-aspartyl-L-proline | chebi:73342 | |
| 2-Phosphoglycolate | 2-phosphoglycolate | (phosphonatooxy)acetate | chebi:58033 | |
| ATP | ATP | ATP | chebi:30616 | |
| ADP | ADP | L-alanyl-L-alpha-aspartyl-L-proline | chebi:73342 | |
| ATP | ATP | ATP | chebi:30616 | |
| Glycolate | glycolate | glycolate | chebi:29805 | |
| Glutamate | Glutamate | (2S)-2-aminopentanedioic acid | chebi:16015 | |
| Glycine | glycine | 2-azaniumylacetate | chebi:57305 | |
| NAD | NAD | adenosine 5'-{3-[1-(3-carbamoylpyridinio)-1,4-anhydro-D-ribitol-5-yl] dihydrogen diphosphate} | chebi:15846 | |
| Glyoxylate | glyoxylate | glyoxylate | chebi:36655 | |
| Methylene | methylene | methylidene | chebi:29358 | |
| Glycine | glycine | 2-azaniumylacetate | chebi:57305 | |
| NADH | NADH | adenosine 5'-{3-[1-(3-carbamoyl-1,4-dihydropyridin-1-yl)-1,4-anhydro-D-ribitol-5-yl] diphosphate} | chebi:57945 | |
| Serine | Serine | L-serine | chebi:17115 | |
| DHAP | DHAP | 3-hydroxy-2-oxopropyl dihydrogen phosphate | chebi:16108 | |
| GAP | GAP | 2-hydroxy-3-oxopropyl dihydrogen phosphate | chebi:17138 | |
| GAP | GAP | 2-hydroxy-3-oxopropyl dihydrogen phosphate | chebi:17138 |
Disease mentions
| Word | Match | MeSH | Name | DOID |
|---|