Schematic depiction of the mTOR signaling network

Schematic depiction of the mTOR signaling network. (A) The most important upstream signals of mTOR signaling are cellular stress, growth factors, and amino acids for the mTORC1 complex, and the insulin/PI3K pathway for mTORC2. Genes of special interest for NGS, due to their mutation frequency, are shown with a red border. No prominent pattern of a section specifically affected by these mutations is obvious. To the best of our best knowledge, no companion diagnostic between a specific mutation and treatment is currently applicable. However, a variety of inhibitors (green) affecting the network at different points are known: Inhibitors affecting AKT, mTORC1/mTORC2, PI3K, PI3K/mTOR, and mTORC1 inhibitors like rapamycin and rapalogs [,]; and (B) the widespread downstream network of mTORC1 and mTORC2 is shown. mTORC1 is involved both in supporting anabolic processes via influencing nucleotide, lipid and protein synthesis, as well as suppressing catabolic processes, mainly autophagy. mTORC2, under the coregulation of AKT, is known to mainly affect cell survival, proliferation and growth, and the specifically the regulation of the cytoskeleton.
Schematic depiction of the mTOR signaling network

Publication

Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels. (2019) Rita Seeboeck, et al. Int J Mol Sci. 2019 Feb;20(3):690. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Drosophila melanogaster Invertebrates WNT WNT ncbigene_synonym Wnt5 32838
Drosophila melanogaster Invertebrates WNT WNT ncbigene_synonym Wnt4 34007
Drosophila melanogaster Invertebrates WNT WNT ncbigene_synonym wg 34009
Drosophila melanogaster Invertebrates WNT WNT ncbigene_synonym Wnt2 35975
Drosophila melanogaster Invertebrates TNFa TNFA ncbigene_synonym egr 36054
Drosophila melanogaster Invertebrates Ras RAS ncbigene_symbol ras 43873
Drosophila melanogaster Invertebrates Ras RAS ncbigene_synonym Ras64B 38494
Drosophila melanogaster Invertebrates Ras RAS ncbigene_synonym Ras85D 41140
Drosophila melanogaster Invertebrates AKT AKT ncbigene_symbol Akt 41957
Drosophila melanogaster Invertebrates TSC TSC ncbigene_symbol Tsc 247509
Drosophila melanogaster Invertebrates TSC TSC ncbigene_synonym Tsc1 42862
Drosophila melanogaster Invertebrates Raptor RAPTOR ncbigene_symbol raptor 31543
Drosophila melanogaster Invertebrates MTOR MTOR ncbigene_symbol Mtor 36264
Drosophila melanogaster Invertebrates MTOR MTOR ncbigene_synonym Tor 47396
Drosophila melanogaster Invertebrates AMPK AMPK ncbigene_synonym SNF4Agamma 42515
Drosophila melanogaster Invertebrates AMPK AMPK ncbigene_synonym AMPKalpha 43904
Drosophila melanogaster Invertebrates PRAS4O PRAS40 ncbigene_symbol PRAS40 26067067
Drosophila melanogaster Invertebrates PI3K/MTORinhibitors PI3K ncbigene_synonym Pi3K21B 33203
Drosophila melanogaster Invertebrates PI3K/MTORinhibitors PI3K ncbigene_synonym Pi3K59F 37733
Drosophila melanogaster Invertebrates PI3K/MTORinhibitors PI3K ncbigene_synonym Pi3K68D 39329
Drosophila melanogaster Invertebrates PI3K/MTORinhibitors PI3K ncbigene_synonym Pi3K92E 42446
Drosophila melanogaster Invertebrates MTORC1 MTORC1 ncbigene_synonym Crtc 39970
Drosophila melanogaster Invertebrates GSK GSK ncbigene_synonym sgg 31248
Drosophila melanogaster Invertebrates P53 P53 ncbigene_symbol p53 2768677
Drosophila melanogaster Invertebrates P53 P53 ncbigene_synonym betaTub60D 37888
Drosophila melanogaster Invertebrates P53 P53 ncbigene_synonym hth 41273
Drosophila melanogaster Invertebrates Rags RAGS ncbigene_symbol rags 252475
Drosophila melanogaster Invertebrates Rictor RICTOR ncbigene_symbol rictor 32919
Drosophila melanogaster Invertebrates Rheb RHEB ncbigene_symbol Rheb 117332
Drosophila melanogaster Invertebrates and AND ncbigene_synonym CkIIbeta 32132
Drosophila melanogaster Invertebrates and AND ncbigene_synonym Andorra 32798
Drosophila melanogaster Invertebrates and AND ncbigene_synonym Anp 43595
Drosophila melanogaster Invertebrates and AND ncbigene_synonym Acam 44913
Drosophila melanogaster Invertebrates AGC AGC ncbigene_synonym tRNA:Ser-GCT-1-1 3771763
Drosophila melanogaster Invertebrates AGC AGC ncbigene_synonym tRNA:Ser-GCT-2-1 3771926
Drosophila melanogaster Invertebrates AGC AGC ncbigene_synonym tRNA:Ser-GCT-2-5 3772051
Drosophila melanogaster Invertebrates AGC AGC ncbigene_synonym tRNA:Ser-GCT-2-3 3772459
Drosophila melanogaster Invertebrates AGC AGC ncbigene_synonym tRNA:Ser-GCT-2-4 3772501
Drosophila melanogaster Invertebrates AGC AGC ncbigene_synonym tRNA:Ser-GCT-2-2 3772707
Drosophila melanogaster Invertebrates Cap CAP ncbigene_symbol CAP 36084
Drosophila melanogaster Invertebrates Cap CAP ncbigene_synonym SMC3 32627
Drosophila melanogaster Invertebrates Cap CAP ncbigene_synonym Cpn 41474
Drosophila melanogaster Invertebrates Cap CAP ncbigene_synonym Capa 43541
Drosophila melanogaster Invertebrates Cap CAP ncbigene_synonym capt 45233
Drosophila melanogaster Invertebrates Cap CAP ncbigene_synonym bel 45826
Drosophila melanogaster Invertebrates Cap CAP ncbigene_synonym SERCA 49297
Drosophila melanogaster Invertebrates Cap CAP ncbigene_synonym Cadps 49968
Drosophila melanogaster Invertebrates CAD CAD ncbigene_symbol cad 35341
Drosophila melanogaster Invertebrates CAD CAD ncbigene_synonym NA 32640
Drosophila melanogaster Invertebrates CAD CAD ncbigene_synonym Drep4 34734
Drosophila melanogaster Invertebrates CAD CAD ncbigene_synonym Ca-alpha1D 34950
Drosophila melanogaster Invertebrates CAD CAD ncbigene_synonym shg 37386
Drosophila melanogaster Invertebrates TFEB TFEB ncbigene_synonym Mitf 3885647
Drosophila melanogaster Invertebrates SKI SKI ncbigene_synonym sktl 37356
Drosophila melanogaster Invertebrates SKI SKI ncbigene_synonym rasp 44098
Drosophila melanogaster Invertebrates SK SK ncbigene_symbol SK 31456
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations ANGPT1 284
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations ANGPT2 285
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations ANGPT4 51378
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations AREG 374
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations BDNF 627
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations CSF1 1435
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations EFNA1 1942
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations EFNA2 1943
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations EFNA3 1944
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations EFNA4 1945
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations EFNA5 1946
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations EGF 1950
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations EREG 2069
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF1 2246
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF10 2255
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF16 8823
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF17 8822
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF18 8817
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF19 9965
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF2 2247
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF20 26281
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF21 26291
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF22 27006
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF23 8074
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF3 2248
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF4 2249
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF5 2250
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF6 2251
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF7 2252
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF8 2253
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FGF9 2254
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations FLT3LG 2323
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations HGF 3082
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations IGF1 3479
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations IGF2 3481
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations INS 3630
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations KITLG 4254
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations NGF 4803
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations NTF3 4908
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations NTF4 4909
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations PDGFA 5154
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations PDGFB 5155
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations PDGFC 56034
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations PDGFD 80310
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations PGF 5228
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations TGFA 7039
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations VEGFA 7422
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations VEGFB 7423
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations VEGFC 7424
Homo sapiens Primates GrowthFactors GROWTHFACTOR famplex_relations VEGFD 2277
Homo sapiens Primates WNT WNT famplex_relations WNT1 7471
Homo sapiens Primates WNT WNT famplex_relations WNT2 7472
Homo sapiens Primates WNT WNT famplex_relations WNT2B 7482
Homo sapiens Primates WNT WNT famplex_relations WNT3 7473
Homo sapiens Primates WNT WNT famplex_relations WNT3A 89780
Homo sapiens Primates WNT WNT famplex_relations WNT4 54361
Homo sapiens Primates WNT WNT famplex_relations WNT6 7475
Homo sapiens Primates WNT WNT famplex_relations WNT7A 7476
Homo sapiens Primates WNT WNT famplex_relations WNT7B 7477
Homo sapiens Primates WNT WNT famplex_relations WNT8A 7478
Homo sapiens Primates WNT WNT famplex_relations WNT8B 7479
Homo sapiens Primates WNT WNT famplex_relations WNT9A 7483
Homo sapiens Primates WNT WNT famplex_relations WNT9B 7484
Homo sapiens Primates WNT WNT famplex_relations WNT10A 80326
Homo sapiens Primates WNT WNT famplex_relations WNT10B 7480
Homo sapiens Primates WNT WNT famplex_relations WNT11 7481
Homo sapiens Primates WNT WNT famplex_relations WNT16 51384
Homo sapiens Primates WNT WNT famplex_relations WNT5A 7474
Homo sapiens Primates WNT WNT famplex_relations WNT5B 81029
Homo sapiens Primates TNFa TNFA ncbigene_synonym TNF 7124
Homo sapiens Primates Ras RAS famplex_relations KRAS 3845
Homo sapiens Primates Ras RAS famplex_relations HRAS 3265
Homo sapiens Primates Ras RAS famplex_relations NRAS 4893
Homo sapiens Primates AKT AKT ncbigene_synonym AKT1 207
Homo sapiens Primates AKT AKT famplex_relations AKT2 208
Homo sapiens Primates AKT AKT famplex_relations AKT3 10000
Homo sapiens Primates TSC TSC ncbigene_synonym SLC12A3 6559
Homo sapiens Primates TSC TSC ncbigene_synonym TSC1 7248
Homo sapiens Primates TSC TSC ncbigene_synonym TESC 54997
Homo sapiens Primates TSC TSC famplex_relations TSC2 7249
Homo sapiens Primates MTOR MTOR ncbigene_symbol MTOR 2475
Homo sapiens Primates AMPK AMPK ncbigene_synonym PRKAA1 5562
Homo sapiens Primates AMPK AMPK ncbigene_synonym PRKAA2 5563
Homo sapiens Primates AMPK AMPK ncbigene_synonym PRKAB1 5564
Homo sapiens Primates AMPK AMPK famplex_relations PRKAB2 5565
Homo sapiens Primates AMPK AMPK famplex_relations PRKAG1 5571
Homo sapiens Primates AMPK AMPK famplex_relations PRKAG2 51422
Homo sapiens Primates AMPK AMPK famplex_relations PRKAG3 53632
Homo sapiens Primates PRAS4O PRAS40 ncbigene_synonym AKT1S1 84335
Homo sapiens Primates PI3K/MTORinhibitors PI3K ncbigene_synonym PIK3CA 5290
Homo sapiens Primates PI3K/MTORinhibitors PI3K ncbigene_synonym PIK3CB 5291
Homo sapiens Primates PI3K/MTORinhibitors PI3K ncbigene_synonym PIK3CD 5293
Homo sapiens Primates PI3K/MTORinhibitors PI3K ncbigene_synonym PIK3CG 5294
Homo sapiens Primates PI3K/MTORinhibitors PI3K famplex_relations PIK3R3 8503
Homo sapiens Primates PI3K/MTORinhibitors PI3K famplex_relations PIK3R4 30849
Homo sapiens Primates PI3K/MTORinhibitors PI3K famplex_relations PIK3R5 23533
Homo sapiens Primates PI3K/MTORinhibitors PI3K famplex_relations PIK3R6 146850
Homo sapiens Primates PI3K/MTORinhibitors PI3K famplex_relations PIK3R1 5295
Homo sapiens Primates PI3K/MTORinhibitors PI3K famplex_relations PIK3R2 5296
Homo sapiens Primates Deptor DEPTOR ncbigene_symbol DEPTOR 64798
Homo sapiens Primates REDD1 REDD1 ncbigene_synonym DDIT4 54541
Homo sapiens Primates MTORC1 MTORC1 famplex_relations RPTOR 57521
Homo sapiens Primates MTORCI/MTORC2 MTORC2 famplex_relations MAPKAP1 79109
Homo sapiens Primates MTORCI/MTORC2 MTORC2 famplex_relations RICTOR 253260
Homo sapiens Primates MTORCI/MTORC2 MTORC2 famplex_relations MLST8 64223
Homo sapiens Primates P53 P53 ncbigene_synonym TP53 7157
Homo sapiens Primates P53 P53 famplex_relations TP63 8626
Homo sapiens Primates P53 P53 famplex_relations TP73 7161
Homo sapiens Primates Protor-1 PROTOR-1 ncbigene_synonym PRR5 55615
Homo sapiens Primates Rheb RHEB ncbigene_symbol RHEB 6009
Homo sapiens Primates Rheb RHEB ncbigene_synonym RHEBP1 6008
Homo sapiens Primates Cap CAP ncbigene_synonym CTAA1 1483
Homo sapiens Primates Cap CAP ncbigene_synonym LNPEP 4012
Homo sapiens Primates Cap CAP ncbigene_synonym SERPINB6 5269
Homo sapiens Primates Cap CAP ncbigene_synonym HACD1 9200
Homo sapiens Primates Cap CAP ncbigene_synonym CAP1 10487
Homo sapiens Primates Cap CAP ncbigene_synonym SORBS1 10580
Homo sapiens Primates Cap CAP ncbigene_synonym BRD4 23476
Homo sapiens Primates Cap CAP famplex_relations CAP2 10486
Homo sapiens Primates CAD CAD ncbigene_symbol CAD 790
Homo sapiens Primates CAD CAD ncbigene_synonym DFFB 1677
Homo sapiens Primates CAD CAD ncbigene_synonym ACOD1 730249
Homo sapiens Primates TFEB TFEB ncbigene_symbol TFEB 7942
Homo sapiens Primates SKI SKI ncbigene_symbol SKI 6497

Chemical mentions

Word Match MeSH Name ChEBI
Rapamycin Sirolimus mesh:D020123 sirolimus chebi:9168
Everolimus NA mesh:C107135
Temsirolimus Temsirolimus mesh:C401859 temsirolimus chebi:79699
Rapamycin F Sirolimus mesh:D020123 sirolimus chebi:9168
GSK-2126458 NA mesh:C561454
Amino NA mesh:D000596
GSK-690693 NA mesh:C528328
Purine Purines mesh:D011687 purines chebi:26401
Pyrimidine NA mesh:C030986
Nucleotide Nucleotides mesh:D009711 nucleotide chebi:36976

Disease mentions

Word Match MeSH Name DOID
Hypoxia NA mesh:D000860