Unfolded protein response pathways

The unfolded protein response (UPR) is mediated by PKR-like ER kinase (PERK), activating transcription factor 6 (ATF6), and inositol-requiring enzyme 1 (IRE1) signaling. Unfolded proteins within the endoplasmic reticulum (ER) lumen lead to activation of ER stress sensors by sequestering glucose-regulated protein 78 kDa (GRP78). ATF4, ATF6f, and spliced x-box binding protein 1 (XBP1s) are adaptive transcription factors activated by the PERK, ATF6, and IRE1 signaling branches respectively, and promote expression of chaperones and protein degradation pathway components. The UPR also engages degradation of cytosolic RNA (regulated IRE1 dependent decay (RIDD) function) and activation of c-Jun N-terminal kinase (JNK) through IRE1, and inhibition of global protein synthesis through PERK.
Unfolded protein response pathways

Publication

The Unfolded Protein Response in Breast Cancer. (2018) Eoghan P. McGrath, et al. Cancers (Basel). 2018 Oct;10(10):344. Figure: F2.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates GRP78 GRP78 ncbigene_synonym HSPA5 3309
Homo sapiens Primates TRAF2 TRAF2 ncbigene_symbol TRAF2 7186
Homo sapiens Primates TRAF2 TRAF2 ncbigene_synonym TANK 10010
Homo sapiens Primates PERK PERK ncbigene_synonym EIF2AK3 9451
Homo sapiens Primates ATF6 ATF6 ncbigene_symbol ATF6 22926
Homo sapiens Primates IRE1 IRE1 ncbigene_synonym ERN1 2081
Homo sapiens Primates ASK1 ASK1 ncbigene_synonym MAP3K5 4217
Homo sapiens Primates JNK JNK ncbigene_synonym MAPK8 5599
Homo sapiens Primates JNK JNK famplex_relations MAPK9 5601
Homo sapiens Primates JNK JNK famplex_relations MAPK10 5602
Homo sapiens Primates elF2a EIF2A ncbigene_symbol EIF2A 83939
Homo sapiens Primates elF2a EIF2A ncbigene_synonym EIF2S1 1965
Homo sapiens Primates Cap-dependent CAP ncbigene_synonym CTAA1 1483
Homo sapiens Primates Cap-dependent CAP ncbigene_synonym LNPEP 4012
Homo sapiens Primates Cap-dependent CAP ncbigene_synonym SERPINB6 5269
Homo sapiens Primates Cap-dependent CAP ncbigene_synonym HACD1 9200
Homo sapiens Primates Cap-dependent CAP ncbigene_synonym CAP1 10487
Homo sapiens Primates Cap-dependent CAP ncbigene_synonym SORBS1 10580
Homo sapiens Primates Cap-dependent CAP ncbigene_synonym BRD4 23476
Homo sapiens Primates Cap-dependent CAP famplex_relations CAP2 10486
Homo sapiens Primates ATF4 ATF4 ncbigene_symbol ATF4 468
Mus musculus Rodents GRP78 GRP78 ncbigene_synonym Hspa5 14828
Mus musculus Rodents TRAF2 TRAF2 ncbigene_symbol Traf2 22030
Mus musculus Rodents PERK PERK ncbigene_synonym Eif2ak3 13666
Mus musculus Rodents PERK PERK ncbigene_synonym Lamp1 16783
Mus musculus Rodents ATF6 ATF6 ncbigene_symbol Atf6 226641
Mus musculus Rodents IRE1 IRE1 ncbigene_synonym Ern2 26918
Mus musculus Rodents ASK1 ASK1 ncbigene_synonym Map3k5 26408
Mus musculus Rodents JNK JNK ncbigene_synonym Mapk8 26419
Mus musculus Rodents elF2a EIF2A ncbigene_symbol Eif2a 229317
Mus musculus Rodents elF2a EIF2A ncbigene_synonym Eif2s1 13665
Mus musculus Rodents Cap-dependent CAP ncbigene_synonym Sorbs1 20411
Mus musculus Rodents Cap-dependent CAP ncbigene_synonym Lnpep 240028
Mus musculus Rodents ATF4 ATF4 ncbigene_symbol Atf4 11911
Drosophila melanogaster Invertebrates GRP78 GRP78 ncbigene_synonym Hsc70-3 32133
Drosophila melanogaster Invertebrates GRP78 GRP78 ncbigene_synonym Hsp70Ab 44920
Drosophila melanogaster Invertebrates TRAF2 TRAF2 ncbigene_synonym Traf6 31746
Drosophila melanogaster Invertebrates PERK PERK ncbigene_synonym PEK 40653
Drosophila melanogaster Invertebrates PERK PERK ncbigene_synonym rl 3354888
Drosophila melanogaster Invertebrates ATF6 ATF6 ncbigene_symbol Atf6 35480
Drosophila melanogaster Invertebrates IRE1 IRE1 ncbigene_symbol Ire1 42358
Drosophila melanogaster Invertebrates IRE1 IRE1 ncbigene_synonym crc 47767
Drosophila melanogaster Invertebrates ASK1 ASK1 ncbigene_symbol Ask1 42366
Drosophila melanogaster Invertebrates JNK JNK ncbigene_synonym bsk 44801
Drosophila melanogaster Invertebrates elF2a ELF2A ncbigene_synonym eIF2alpha 32617
Drosophila melanogaster Invertebrates elF2a EIF2A ncbigene_symbol eIF2A 40431
Drosophila melanogaster Invertebrates Cap-dependent CAP ncbigene_symbol CAP 36084
Drosophila melanogaster Invertebrates Cap-dependent CAP ncbigene_synonym SMC3 32627
Drosophila melanogaster Invertebrates Cap-dependent CAP ncbigene_synonym Cpn 41474
Drosophila melanogaster Invertebrates Cap-dependent CAP ncbigene_synonym Capa 43541
Drosophila melanogaster Invertebrates Cap-dependent CAP ncbigene_synonym capt 45233
Drosophila melanogaster Invertebrates Cap-dependent CAP ncbigene_synonym bel 45826
Drosophila melanogaster Invertebrates Cap-dependent CAP ncbigene_synonym SERCA 49297
Drosophila melanogaster Invertebrates Cap-dependent CAP ncbigene_synonym Cadps 49968
Caenorhabditis elegans Invertebrates ATF6 ATF6 ncbigene_symbol atf-6 181405
Caenorhabditis elegans Invertebrates IRE1 IRE1 ncbigene_symbol ire-1 174305
Caenorhabditis elegans Invertebrates elF2a EIF2A ncbigene_symbol eif-2alpha 171769
Caenorhabditis elegans Invertebrates elF2a EIF2A ncbigene_symbol eif-2A 174606
Caenorhabditis elegans Invertebrates ATF4 ATF4 ncbigene_symbol atf-4 181576

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID
RIDD NA