Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds

C. sinensis unigenes involved in three secondary metabolic pathways. (a) C. sinensis unigenes involved in the pathway of flavonoid biosynthesis. (b) C. sinensis unigenes involved in the pathway of theanine biosynthesis. Putative theanine biosynthesis pathway is based on Sasaoka K (No. 48 in References). (c) C. sinensis unigenes involved in the pathway of caffeine biosynthesis. The red number in the bracket following each gene name indicates the number of corresponding C. sinensis unigenes.
Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds
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Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds. (2011) Cheng-Ying Shi, et al. BMC Genomics. 2011;12:131-131. Figure: F7.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates PAL PAL ncbigene_synonym PAM 5066
Homo sapiens Primates PAL PAL ncbigene_synonym LRIT1 26103
Homo sapiens Primates PAL PAL ncbigene_synonym SHCBP1 79801
Homo sapiens Primates CHS CHS ncbigene_synonym LYST 1130
Homo sapiens Primates (+gallocatechin,GC] GC ncbigene_symbol GC 2638
Homo sapiens Primates GMPR(1) GMPR1 ncbigene_synonym GMPR 2766
Homo sapiens Primates GMPS GMPS ncbigene_symbol GMPS 8833
Homo sapiens Primates XMP XMP ncbigene_synonym EMP2 2013
Homo sapiens Primates IMP IMP ncbigene_synonym IMPA1 3612
Homo sapiens Primates IMP IMP ncbigene_synonym BRAP 8315
Homo sapiens Primates GMP GMP ncbigene_synonym NT5C2 22978
Homo sapiens Primates ASS ASS ncbigene_synonym ASS1 445
Homo sapiens Primates AIDA AIDA ncbigene_symbol AIDA 64853
Homo sapiens Primates AIDA AIDA ncbigene_synonym ANKS1B 56899
Homo sapiens Primates ALT ALT ncbigene_synonym GPT 2875
Homo sapiens Primates ASL ASL ncbigene_symbol ASL 435
Homo sapiens Primates ASL ASL ncbigene_synonym ADSL 158
Homo sapiens Primates GDA GDA ncbigene_symbol GDA 9615
Homo sapiens Primates GDA GDA ncbigene_synonym PAEP 5047
Homo sapiens Primates GDA GDA ncbigene_synonym SLC25A16 8034
Homo sapiens Primates AMP AMP ncbigene_synonym APRT 353
Homo sapiens Primates AMP AMP ncbigene_synonym MFAP1 4236
Homo sapiens Primates ATPase ATPASE ncbigene_synonym DNAH8 1769
Homo sapiens Primates ATP ATP ncbigene_synonym ATP8A2 51761
Homo sapiens Primates SAMS SAMS ncbigene_synonym MAT1A 4143
Homo sapiens Primates SAMS SAMS ncbigene_synonym GSC 145258
Homo sapiens Primates GDH GDH ncbigene_synonym GLUD1 2746
Homo sapiens Primates GDH GDH ncbigene_synonym UGDH 7358
Homo sapiens Primates GDH GDH ncbigene_synonym H6PD 9563
Homo sapiens Primates GDH GDH ncbigene_synonym CRYL1 51084
Homo sapiens Primates TCS TCS ncbigene_synonym TCOF1 6949
Drosophila melanogaster Invertebrates PAL PAL ncbigene_symbol pal 45912
Drosophila melanogaster Invertebrates PAL PAL ncbigene_synonym Pal2 37746
Drosophila melanogaster Invertebrates CHI CHI ncbigene_symbol Chi 37837
Drosophila melanogaster Invertebrates CHI CHI ncbigene_synonym chic 33834
Drosophila melanogaster Invertebrates DFR DFR ncbigene_synonym ppk 34843
Drosophila melanogaster Invertebrates DFR DFR ncbigene_synonym vvl 38752
Drosophila melanogaster Invertebrates (+gallocatechin,GC] GC ncbigene_symbol GC 38194
Drosophila melanogaster Invertebrates EC; EC ncbigene_symbol ec 31339
Drosophila melanogaster Invertebrates AA AA ncbigene_symbol aa 44792
Drosophila melanogaster Invertebrates GMPS GMPS ncbigene_synonym bur 45830
Drosophila melanogaster Invertebrates IMPDH IMPDH ncbigene_synonym ras 43873
Drosophila melanogaster Invertebrates IMP IMP ncbigene_symbol Imp 32009
Drosophila melanogaster Invertebrates IMP IMP ncbigene_synonym CG11110 37337
Drosophila melanogaster Invertebrates IMP IMP ncbigene_synonym CG17029 39740
Drosophila melanogaster Invertebrates IMP IMP ncbigene_synonym CG17028 39741
Drosophila melanogaster Invertebrates IMP IMP ncbigene_synonym CG17027 39742
Drosophila melanogaster Invertebrates IMP IMP ncbigene_synonym CG9391 40346
Drosophila melanogaster Invertebrates IMP IMP ncbigene_synonym CG9389 40347
Drosophila melanogaster Invertebrates GMP GMP ncbigene_synonym fliF 45309
Drosophila melanogaster Invertebrates ↑TS TS ncbigene_symbol Ts 33499
Drosophila melanogaster Invertebrates ASS ASS ncbigene_symbol Ass 40812
Drosophila melanogaster Invertebrates ALT ALT ncbigene_symbol alt 42127
Drosophila melanogaster Invertebrates ALT ALT ncbigene_synonym CG1640 32292
Drosophila melanogaster Invertebrates ASL ASL ncbigene_symbol asl 40682
Drosophila melanogaster Invertebrates AMP AMP ncbigene_synonym Amph 36383
Drosophila melanogaster Invertebrates ATPase ATPASE ncbigene_synonym Vha14-1 36731
Drosophila melanogaster Invertebrates ATP ATP ncbigene_synonym ATPsynbeta 43829
Drosophila melanogaster Invertebrates ATP ATP ncbigene_synonym Atpalpha 48971
Drosophila melanogaster Invertebrates SAMS SAMS ncbigene_symbol Sam-S 48552
Drosophila melanogaster Invertebrates GDH GDH ncbigene_symbol Gdh 42832
Drosophila melanogaster Invertebrates GDH GDH ncbigene_synonym Gpdh1 33824
Drosophila melanogaster Invertebrates GDH GDH ncbigene_synonym Gld 40875

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID