Antibodies against CD20 or B-Cell Receptor Induce Similar Transcription Patterns in Human Lymphoma Cell Lines
IPA generated network of interactions between genes deregulated by anti-CD20 antibodies in SUDHL4 and REC1. The red circle marks genes which are also deregulated by all anti-BCR treatments. Interestingly this unbiased analysis displays deregulations of BCR components and the downstream signaling pathway.
Publication
Antibodies against CD20 or B-Cell Receptor Induce Similar Transcription Patterns in Human Lymphoma Cell Lines. (2011) Andreas Franke, et al. PLoS One. 2011;6(2):e16596. Figure: F4.| Organism | Group | Word | Match | Source | NCBI Symbol | NCBI ID |
|---|---|---|---|---|---|---|
| Homo sapiens | Primates | TRIM22 | TRIM22 | ncbigene_symbol | TRIM22 | 10346 |
| Homo sapiens | Primates | DDB2 | DDB2 | ncbigene_symbol | DDB2 | 1643 |
| Homo sapiens | Primates | BCL2A1 | BCL2A1 | ncbigene_symbol | BCL2A1 | 597 |
| Homo sapiens | Primates | RTKN | RTKN | ncbigene_symbol | RTKN | 6242 |
| Homo sapiens | Primates | SCARB1 | SCARB1 | ncbigene_symbol | SCARB1 | 949 |
| Homo sapiens | Primates | UPP1 | UPP1 | ncbigene_symbol | UPP1 | 7378 |
| Homo sapiens | Primates | TRA | TRA | ncbigene_symbol | TRA | 6955 |
| Homo sapiens | Primates | TRA | TRA | ncbigene_synonym | THRA | 7067 |
| Homo sapiens | Primates | TRA | TRA | ncbigene_synonym | TRAC | 28755 |
| Homo sapiens | Primates | CREM | CREM | ncbigene_symbol | CREM | 1390 |
| Homo sapiens | Primates | Creb | CREB | ncbigene_synonym | CREB1 | 1385 |
| Homo sapiens | Primates | Creb | CREB | famplex_relations | CREB3 | 10488 |
| Homo sapiens | Primates | Creb | CREB | famplex_relations | CREB5 | 9586 |
| Homo sapiens | Primates | Creb | CREB | famplex_relations | CREB3L1 | 90993 |
| Homo sapiens | Primates | Creb | CREB | famplex_relations | CREB3L2 | 64764 |
| Homo sapiens | Primates | Creb | CREB | famplex_relations | CREB3L3 | 84699 |
| Homo sapiens | Primates | Creb | CREB | famplex_relations | CREB3L4 | 148327 |
| Homo sapiens | Primates | Creb | CREB | famplex_relations | ATF1 | 466 |
| Homo sapiens | Primates | Creb | CREB | famplex_relations | ATF2 | 1386 |
| Homo sapiens | Primates | (fam | FAM | ncbigene_synonym | USP9X | 8239 |
| Homo sapiens | Primates | Jam | JAM | ncbigene_synonym | F11R | 50848 |
| Homo sapiens | Primates | MAP | MAP | ncbigene_synonym | SGSM3 | 27352 |
| Homo sapiens | Primates | BCL2 | BCL2 | ncbigene_symbol | BCL2 | 596 |
| Homo sapiens | Primates | HMMR | HMMR | ncbigene_symbol | HMMR | 3161 |
| Homo sapiens | Primates | ALL | ALL | ncbigene_synonym | BCR | 613 |
| Homo sapiens | Primates | VASP | VASP | ncbigene_symbol | VASP | 7408 |
| Homo sapiens | Primates | ETS1 | ETS1 | ncbigene_symbol | ETS1 | 2113 |
| Homo sapiens | Primates | DAPP1 | DAPP1 | ncbigene_symbol | DAPP1 | 27071 |
| Homo sapiens | Primates | SRGN | SRGN | ncbigene_symbol | SRGN | 5552 |
| Homo sapiens | Primates | ATP2A3 | ATP2A3 | ncbigene_symbol | ATP2A3 | 489 |
| Mus musculus | Rodents | DDB2 | DDB2 | ncbigene_symbol | Ddb2 | 107986 |
| Mus musculus | Rodents | BCL2A1 | BCL2A1 | ncbigene_synonym | Bcl2a1a | 12044 |
| Mus musculus | Rodents | RTKN | RTKN | ncbigene_symbol | Rtkn | 20166 |
| Mus musculus | Rodents | SCARB1 | SCARB1 | ncbigene_symbol | Scarb1 | 20778 |
| Mus musculus | Rodents | UPP1 | UPP1 | ncbigene_symbol | Upp1 | 22271 |
| Mus musculus | Rodents | TRA | TRA | ncbigene_synonym | Gnat1 | 14685 |
| Mus musculus | Rodents | CREM | CREM | ncbigene_symbol | Crem | 12916 |
| Mus musculus | Rodents | Creb | CREB | ncbigene_synonym | Creb1 | 12912 |
| Mus musculus | Rodents | (fam | FAM | ncbigene_synonym | Faf1 | 14084 |
| Mus musculus | Rodents | (fam | FAM | ncbigene_synonym | Fgf1 | 14164 |
| Mus musculus | Rodents | Jam | JAM | ncbigene_synonym | F11r | 16456 |
| Mus musculus | Rodents | BCL2 | BCL2 | ncbigene_symbol | Bcl2 | 12043 |
| Mus musculus | Rodents | HMMR | HMMR | ncbigene_symbol | Hmmr | 15366 |
| Mus musculus | Rodents | VASP | VASP | ncbigene_symbol | Vasp | 22323 |
| Mus musculus | Rodents | ETS1 | ETS1 | ncbigene_symbol | Ets1 | 23871 |
| Mus musculus | Rodents | DAPP1 | DAPP1 | ncbigene_symbol | Dapp1 | 26377 |
| Mus musculus | Rodents | SRGN | SRGN | ncbigene_symbol | Srgn | 19073 |
| Mus musculus | Rodents | ATP2A3 | ATP2A3 | ncbigene_symbol | Atp2a3 | 53313 |
| Danio rerio | Vertebrates | DDB2 | DDB2 | ncbigene_symbol | ddb2 | 100004133 |
| Danio rerio | Vertebrates | SCARB1 | SCARB1 | ncbigene_symbol | scarb1 | 387260 |
| Danio rerio | Vertebrates | UPP1 | UPP1 | ncbigene_symbol | upp1 | 503707 |
| Danio rerio | Vertebrates | TRA | TRA | ncbigene_synonym | thraa | 30670 |
| Danio rerio | Vertebrates | Jam | JAM | ncbigene_synonym | f11r.1 | 323696 |
| Danio rerio | Vertebrates | BCL2 | BCL2 | ncbigene_synonym | bcl2a | 570772 |
| Danio rerio | Vertebrates | HMMR | HMMR | ncbigene_symbol | hmmr | 322012 |
| Danio rerio | Vertebrates | VASP | VASP | ncbigene_synonym | vaspb | 550487 |
| Danio rerio | Vertebrates | VASP | VASP | ncbigene_synonym | vaspa | 555805 |
| Danio rerio | Vertebrates | ETS1 | ETS1 | ncbigene_symbol | ets1 | 280651 |
| Danio rerio | Vertebrates | DAPP1 | DAPP1 | ncbigene_symbol | dapp1 | 550386 |
| Danio rerio | Vertebrates | SRGN | SRGN | ncbigene_symbol | srgn | 570867 |
| Danio rerio | Vertebrates | ATP2A3 | ATP2A3 | ncbigene_symbol | atp2a3 | 568671 |
| Word | Match | MeSH | Name | ChEBI |
|---|
Disease mentions
| Word | Match | MeSH | Name | DOID |
|---|