Examples of reaction–diffusion processes in muscle

Examples of reaction–diffusion processes in muscle. (A) O2 diffusion entails reversible binding with hemoglobin (Hb) or another blood pigment type, and with myoglobin (Mb) in some fiber types. (B) Diffusion of ATP to cellular ATPases involves the reversible transfer of a phosphoryl group from ATP to an acceptor molecule such as creatine (Cr) or arginine (Arg), forming the phosphagen phosphocreatine (PCr) or arginine phosphate (AP), respectively. Phosphagen kinases, such as creatine kinase (CK) or arginine kinase (AK) catalyze these reactions. (C) Ca2+ is released from the sarcoplasmic reticulum (SR) upon muscle stimulation and must diffuse to and bind myofibrillar troponin C (TnC) to activate contraction. Relaxation entails the uptake of Ca2+ into the SR, where reversible binding to calsequestrin (Cs) may occur. In some fiber types, parvalbumin (PA) reversibly binds Ca2+ that is in the sarcoplasm. In addition, ATP binds Ca2+ and may further facilitate diffusion (not shown). (D) Transcription and translation entails diffusive flux of nuclear products to various sites of action in the cell. In all cases, the red arrows indicate protein-mediated binding, transport or catalysis, while the black arrows indicate diffusion. The thickness of the arrows indicates the relative importance of the diffusive pathway. Dashed lines indicate that Mb and PA are not present in all fiber types.
Examples of reaction–diffusion processes in muscle

Publication

Molecules in motion: influences of diffusion on metabolic structure and function in skeletal muscle. (2011) Stephen T. Kinsey, et al. J Exp Biol. 2011 Jan 15;214(2):263-274. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Drosophila melanogaster Invertebrates Mbo,----MbO, MBO ncbigene_symbol mbo 41562
Drosophila melanogaster Invertebrates Net NET ncbigene_symbol net 45339
Drosophila melanogaster Invertebrates Net NET ncbigene_synonym Neto 32303
Drosophila melanogaster Invertebrates Net NET ncbigene_synonym NetA 32398
Drosophila melanogaster Invertebrates Net NET ncbigene_synonym NetB 32400
Drosophila melanogaster Invertebrates Hb HB ncbigene_symbol hb 41032
Drosophila melanogaster Invertebrates Mb MB ncbigene_symbol mb 249737
Drosophila melanogaster Invertebrates Mb MB ncbigene_synonym E(spl)mbeta-HLH 43152
Drosophila melanogaster Invertebrates ADP ADP ncbigene_symbol adp 37073
Drosophila melanogaster Invertebrates PCm PCM ncbigene_symbol pcm 32935
Drosophila melanogaster Invertebrates AP/PCm AP ncbigene_symbol ap 35509
Drosophila melanogaster Invertebrates PC PC ncbigene_symbol Pc 40358
Drosophila melanogaster Invertebrates CK CK ncbigene_symbol ck 34882
Drosophila melanogaster Invertebrates ATPase ATPASE ncbigene_synonym Vha14-1 36731
Drosophila melanogaster Invertebrates Arg ARG ncbigene_symbol arg 46717
Drosophila melanogaster Invertebrates Arg ARG ncbigene_synonym aos 39833
Drosophila melanogaster Invertebrates Cr CR ncbigene_symbol CR 5657006
Drosophila melanogaster Invertebrates ATP ATP ncbigene_synonym ATPsynbeta 43829
Drosophila melanogaster Invertebrates ATP ATP ncbigene_synonym Atpalpha 48971
Drosophila melanogaster Invertebrates It IT ncbigene_symbol I-t 41414
Drosophila melanogaster Invertebrates Ca- CA ncbigene_symbol ca 43518
Drosophila melanogaster Invertebrates Cs CS ncbigene_symbol cs 248200
Drosophila melanogaster Invertebrates PA PA ncbigene_symbol Pa 251550
Drosophila melanogaster Invertebrates TnC TNC ncbigene_symbol tnc 42990
Drosophila melanogaster Invertebrates TnC TNC ncbigene_synonym TpnC25D 33752
Drosophila melanogaster Invertebrates TnC TNC ncbigene_synonym TpnC41C 35473
Drosophila melanogaster Invertebrates TnC TNC ncbigene_synonym TpnC4 35498
Drosophila melanogaster Invertebrates TnC TNC ncbigene_synonym TpnC47D 36195
Drosophila melanogaster Invertebrates TnC TNC ncbigene_synonym TpnC73F 39916
Homo sapiens Primates Net NET ncbigene_synonym ELK3 2004
Homo sapiens Primates Net NET ncbigene_synonym EPHB1 2047
Homo sapiens Primates Net NET ncbigene_synonym SLC6A2 6530
Homo sapiens Primates Hb HB ncbigene_synonym GSTM1 2944
Homo sapiens Primates Mb MB ncbigene_symbol MB 4151
Homo sapiens Primates ADP ADP ncbigene_synonym WDTC1 23038
Homo sapiens Primates PC PC ncbigene_symbol PC 5091
Homo sapiens Primates ATPase ATPASE ncbigene_synonym DNAH8 1769
Homo sapiens Primates Arg ARG ncbigene_synonym ABL2 27
Homo sapiens Primates Arg ARG ncbigene_synonym RERE 473
Homo sapiens Primates ATP ATP ncbigene_synonym ATP8A2 51761
Homo sapiens Primates PACA? PACA ncbigene_synonym PTF1A 256297
Homo sapiens Primates Cs CS ncbigene_symbol CS 1431
Homo sapiens Primates TnC TNC ncbigene_symbol TNC 3371
Homo sapiens Primates TnC TNC ncbigene_synonym TNNC1 7134

Chemical mentions

Word Match MeSH Name ChEBI
Arg Arginine mesh:D001120 arginine chebi:29016

Disease mentions

Word Match MeSH Name DOID