Stbd1 participation in glycogen metabolism and Stbd1 structure
Model for Stbd1 participation in glycogen metabolism and Stbd1 structure. A, classic cytosolic pathway of glycogen synthesis from glucose (Glc) via glucose-6-phosphate (Glc-6-P), glucose-1-phosphate (Glc-1-P) and the glucosyl donor UDP-glucose (UDP-Glc) is mediated by glycogenin (GN), glycogen synthase (GS) and branching enzyme (BE). Degradation to yield Glc-1-P is catalyzed by glycogen phosphorylase (Ph) and debranching enzyme (DBE). A second pathway for glycogen breakdown involves transfer to lysosomes where it is hydrolyzed to glucose by lysosomal α-glycosidase (GAA). From the results of this study, we propose that Stbd1 participates in the vesicular trafficking of glycogen, mediated also by its interaction with GABARABL1 (or maybe GABARAP). In a number of diseases and mouse models, abnormal glycogen deposits can be formed, some possibly with elements of membranes associated. B, a number of the enzymes involved in glycogen metabolism can be partially purified with glycogen. PhK, phosphorylase kinase; PP1, type 1 protein phosphatase; PTG and RGL, glycogen binding PP1 targeting subunits; PP1c, catalytic subunit of PP1; LF, laforin. Shown also is the proposed role for Stbd1, anchoring glycogen to an intracellular membrane and interacting with GABARAPL1 (G-L1).

Publication
Starch Binding Domain-containing Protein 1/Genethonin 1 Is a Novel Participant in Glycogen Metabolism. (2010) Sixin Jiang, et al. J Biol Chem. 2010 Nov 5;285(45):34960-34971. Figure: F8.Organism | Group | Word | Match | Source | NCBI Symbol | NCBI ID |
---|---|---|---|---|---|---|
Drosophila melanogaster | Invertebrates | Glc | GLC | ncbigene_synonym | GluClalpha | 42350 |
Drosophila melanogaster | Invertebrates | Glc | GLC | ncbigene_synonym | betaGlu | 43746 |
Drosophila melanogaster | Invertebrates | LF | LF | ncbigene_symbol | lf | 45324 |
Drosophila melanogaster | Invertebrates | PP1C | PP1C | ncbigene_synonym | Pp1alpha-96A | 42922 |
Drosophila melanogaster | Invertebrates | PP1C | PP1C | ncbigene_synonym | flw | 44289 |
Drosophila melanogaster | Invertebrates | PP1C | PP1C | ncbigene_synonym | Pp1-13C | 48531 |
Drosophila melanogaster | Invertebrates | PP1C | PP1C | ncbigene_synonym | Pp1-87B | 49260 |
Drosophila melanogaster | Invertebrates | GAA | GAA | ncbigene_synonym | Galphas | 37805 |
Drosophila melanogaster | Invertebrates | GAA | GAA | ncbigene_synonym | tRNA:Glu-TTC-1-5 | 3772147 |
Drosophila melanogaster | Invertebrates | GAA | GAA | ncbigene_synonym | tRNA:Glu-TTC-1-3 | 3772259 |
Drosophila melanogaster | Invertebrates | GAA | GAA | ncbigene_synonym | tRNA:Glu-TTC-1-2 | 3772286 |
Drosophila melanogaster | Invertebrates | GAA | GAA | ncbigene_synonym | tRNA:Glu-TTC-1-6 | 3772441 |
Drosophila melanogaster | Invertebrates | GAA | GAA | ncbigene_synonym | tRNA:Glu-TTC-1-1 | 3772488 |
Drosophila melanogaster | Invertebrates | GAA | GAA | ncbigene_synonym | tRNA:Glu-TTC-1-4 | 3772503 |
Drosophila melanogaster | Invertebrates | DBE | DBE | ncbigene_symbol | dbe | 33269 |
Drosophila melanogaster | Invertebrates | PTG | PTG | ncbigene_symbol | ptg | 44850 |
Drosophila melanogaster | Invertebrates | RaL | RAL | ncbigene_synonym | Rala | 31332 |
Drosophila melanogaster | Invertebrates | RaL | RAL | ncbigene_synonym | r-l | 42493 |
Drosophila melanogaster | Invertebrates | GN | GN | ncbigene_symbol | gn | 251206 |
Drosophila melanogaster | Invertebrates | Gs | GS | ncbigene_symbol | gs | 5656925 |
Drosophila melanogaster | Invertebrates | BE | BE | ncbigene_symbol | be | 32430 |
Homo sapiens | Primates | particle | PARTICLE | ncbigene_synonym | PARTICL | 100630918 |
Homo sapiens | Primates | PP1C | PP1C | ncbigene_synonym | PPP1CB | 5500 |
Homo sapiens | Primates | PP1C | PP1C | ncbigene_synonym | PPP1CC | 5501 |
Homo sapiens | Primates | GAA | GAA | ncbigene_symbol | GAA | 2548 |
Homo sapiens | Primates | GABARAP? | GABARAP | ncbigene_symbol | GABARAP | 11337 |
Homo sapiens | Primates | GABARAPL1 | GABARAPL1 | ncbigene_symbol | GABARAPL1 | 23710 |
Homo sapiens | Primates | Stbd1 | STBD1 | ncbigene_symbol | STBD1 | 8987 |
Homo sapiens | Primates | PTG | PTG | ncbigene_synonym | PPP1R3C | 5507 |
Homo sapiens | Primates | PTG | PTG | ncbigene_synonym | PPP1R3B | 79660 |
Homo sapiens | Primates | Glc-1-P | GLC1P | ncbigene_symbol | GLC1P | 101448070 |
Homo sapiens | Primates | RaL | RAL | ncbigene_synonym | RALA | 5898 |
Homo sapiens | Primates | RaL | RAL | famplex_relations | RALB | 5899 |
Homo sapiens | Primates | Gs | GS | famplex_relations | GNAS | 2778 |
Homo sapiens | Primates | Gs | GS | famplex_relations | GNAL | 2774 |
Homo sapiens | Primates | PhK | PHK | ncbigene_synonym | PHKA2 | 5256 |
Homo sapiens | Primates | PhK | PHK | famplex_relations | CALM1 | 801 |
Homo sapiens | Primates | PhK | PHK | famplex_relations | PHKA1 | 5255 |
Homo sapiens | Primates | PhK | PHK | famplex_relations | PHKB | 5257 |
Homo sapiens | Primates | PhK | PHK | famplex_relations | PHKG1 | 5260 |
Homo sapiens | Primates | PhK | PHK | famplex_relations | PHKG2 | 5261 |
Word | Match | MeSH | Name | ChEBI |
---|---|---|---|---|
UDP | Uridine Diphosphate | mesh:D014530 | UDP | chebi:17659 |
Disease mentions
Word | Match | MeSH | Name | DOID |
---|---|---|---|---|
Glycogen storage disease | NA |