Stbd1 participation in glycogen metabolism and Stbd1 structure

Model for Stbd1 participation in glycogen metabolism and Stbd1 structure. A, classic cytosolic pathway of glycogen synthesis from glucose (Glc) via glucose-6-phosphate (Glc-6-P), glucose-1-phosphate (Glc-1-P) and the glucosyl donor UDP-glucose (UDP-Glc) is mediated by glycogenin (GN), glycogen synthase (GS) and branching enzyme (BE). Degradation to yield Glc-1-P is catalyzed by glycogen phosphorylase (Ph) and debranching enzyme (DBE). A second pathway for glycogen breakdown involves transfer to lysosomes where it is hydrolyzed to glucose by lysosomal α-glycosidase (GAA). From the results of this study, we propose that Stbd1 participates in the vesicular trafficking of glycogen, mediated also by its interaction with GABARABL1 (or maybe GABARAP). In a number of diseases and mouse models, abnormal glycogen deposits can be formed, some possibly with elements of membranes associated. B, a number of the enzymes involved in glycogen metabolism can be partially purified with glycogen. PhK, phosphorylase kinase; PP1, type 1 protein phosphatase; PTG and RGL, glycogen binding PP1 targeting subunits; PP1c, catalytic subunit of PP1; LF, laforin. Shown also is the proposed role for Stbd1, anchoring glycogen to an intracellular membrane and interacting with GABARAPL1 (G-L1).
Stbd1 participation in glycogen metabolism and Stbd1 structure

Publication

Starch Binding Domain-containing Protein 1/Genethonin 1 Is a Novel Participant in Glycogen Metabolism. (2010) Sixin Jiang, et al. J Biol Chem. 2010 Nov 5;285(45):34960-34971. Figure: F8.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Drosophila melanogaster Invertebrates Glc GLC ncbigene_synonym GluClalpha 42350
Drosophila melanogaster Invertebrates Glc GLC ncbigene_synonym betaGlu 43746
Drosophila melanogaster Invertebrates LF LF ncbigene_symbol lf 45324
Drosophila melanogaster Invertebrates PP1C PP1C ncbigene_synonym Pp1alpha-96A 42922
Drosophila melanogaster Invertebrates PP1C PP1C ncbigene_synonym flw 44289
Drosophila melanogaster Invertebrates PP1C PP1C ncbigene_synonym Pp1-13C 48531
Drosophila melanogaster Invertebrates PP1C PP1C ncbigene_synonym Pp1-87B 49260
Drosophila melanogaster Invertebrates GAA GAA ncbigene_synonym Galphas 37805
Drosophila melanogaster Invertebrates GAA GAA ncbigene_synonym tRNA:Glu-TTC-1-5 3772147
Drosophila melanogaster Invertebrates GAA GAA ncbigene_synonym tRNA:Glu-TTC-1-3 3772259
Drosophila melanogaster Invertebrates GAA GAA ncbigene_synonym tRNA:Glu-TTC-1-2 3772286
Drosophila melanogaster Invertebrates GAA GAA ncbigene_synonym tRNA:Glu-TTC-1-6 3772441
Drosophila melanogaster Invertebrates GAA GAA ncbigene_synonym tRNA:Glu-TTC-1-1 3772488
Drosophila melanogaster Invertebrates GAA GAA ncbigene_synonym tRNA:Glu-TTC-1-4 3772503
Drosophila melanogaster Invertebrates DBE DBE ncbigene_symbol dbe 33269
Drosophila melanogaster Invertebrates PTG PTG ncbigene_symbol ptg 44850
Drosophila melanogaster Invertebrates RaL RAL ncbigene_synonym Rala 31332
Drosophila melanogaster Invertebrates RaL RAL ncbigene_synonym r-l 42493
Drosophila melanogaster Invertebrates GN GN ncbigene_symbol gn 251206
Drosophila melanogaster Invertebrates Gs GS ncbigene_symbol gs 5656925
Drosophila melanogaster Invertebrates BE BE ncbigene_symbol be 32430
Homo sapiens Primates particle PARTICLE ncbigene_synonym PARTICL 100630918
Homo sapiens Primates PP1C PP1C ncbigene_synonym PPP1CB 5500
Homo sapiens Primates PP1C PP1C ncbigene_synonym PPP1CC 5501
Homo sapiens Primates GAA GAA ncbigene_symbol GAA 2548
Homo sapiens Primates GABARAP? GABARAP ncbigene_symbol GABARAP 11337
Homo sapiens Primates GABARAPL1 GABARAPL1 ncbigene_symbol GABARAPL1 23710
Homo sapiens Primates Stbd1 STBD1 ncbigene_symbol STBD1 8987
Homo sapiens Primates PTG PTG ncbigene_synonym PPP1R3C 5507
Homo sapiens Primates PTG PTG ncbigene_synonym PPP1R3B 79660
Homo sapiens Primates Glc-1-P GLC1P ncbigene_symbol GLC1P 101448070
Homo sapiens Primates RaL RAL ncbigene_synonym RALA 5898
Homo sapiens Primates RaL RAL famplex_relations RALB 5899
Homo sapiens Primates Gs GS famplex_relations GNAS 2778
Homo sapiens Primates Gs GS famplex_relations GNAL 2774
Homo sapiens Primates PhK PHK ncbigene_synonym PHKA2 5256
Homo sapiens Primates PhK PHK famplex_relations CALM1 801
Homo sapiens Primates PhK PHK famplex_relations PHKA1 5255
Homo sapiens Primates PhK PHK famplex_relations PHKB 5257
Homo sapiens Primates PhK PHK famplex_relations PHKG1 5260
Homo sapiens Primates PhK PHK famplex_relations PHKG2 5261

Chemical mentions

Word Match MeSH Name ChEBI
UDP Uridine Diphosphate mesh:D014530 UDP chebi:17659

Disease mentions

Word Match MeSH Name DOID
Glycogen storage disease NA