Normal biology of the VHL-HIF axis in the setting of (A) normoxia and (B) hypoxia

Normal biology of the VHL-HIF axis in the setting of (A) normoxia and (B) hypoxia. In normoxic conditions, HIFα is hydroxylated on specific proline residues by prolyl-hydroxylases. VHL acts as the sensor for these hydroxylated proline residues as part of the VHL-E3 ubiquitin ligase. This polyubiquitinates HIFα and marks it for degradation by the proteasome. In hypoxic conditions (or in the presence of aberrant VHL), HIFα is allowed to accumulate in the cell. (C) It associates with HIFβ, and this complex translocates to the nucleus and acts as a transcription factor binding to hypoxia response elements and up-regulating oxygen sensitive genes. These include vascular endothelial growth factor (VEGF), platelet-derived growth factor (PDGF), transforming growth factor alpha (TGFα), glucose transporter-1 (GLUT1), carbonic anhydrase IX (CA-IX), erythropoietin (EPO), and others. Examples of certain ligands’ receptors are given, including VEGF receptor (VEGFR), PDGF receptor (PDGFR), and the receptor for TNFα, epidermal growth factor receptor (EGFR). Shown is the downstream signaling for 1 of these receptors, VEGFR, including through the PI3 kinase (PI3K)/AKT/mTOR, p38 MAP kinase (p38MAPK), and RAS/RAF/MEK/ERK pathways. Examples of agents that impact on this cascade are given, and where they act on the pathway is shown.
Normal biology of the VHL-HIF axis in the setting of (A) normoxia and (B) hypoxia

Publication

The von Hippel-Lindau Gene. () Peter E. Clark, et al. Cancer. ;113(7 Suppl):1768-1778. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Drosophila melanogaster Invertebrates VHL VHL ncbigene_symbol Vhl 53433
Drosophila melanogaster Invertebrates HIFA HIFA ncbigene_synonym sima 43580
Drosophila melanogaster Invertebrates E3 E3 ncbigene_symbol E3 5658048
Drosophila melanogaster Invertebrates MTOR MTOR ncbigene_symbol Mtor 36264
Drosophila melanogaster Invertebrates MTOR MTOR ncbigene_synonym Tor 47396
Drosophila melanogaster Invertebrates BNIP3 BNIP3 ncbigene_symbol BNIP3 40278
Drosophila melanogaster Invertebrates GLUT1 GLUT1 ncbigene_symbol Glut1 38109
Drosophila melanogaster Invertebrates VEGF VEGF ncbigene_synonym Pvf1 32876
Drosophila melanogaster Invertebrates VEGF VEGF ncbigene_synonym Pvf2 33994
Drosophila melanogaster Invertebrates VEGF VEGF ncbigene_synonym Pvf3 33995
Drosophila melanogaster Invertebrates VEGF VEGF ncbigene_synonym Pvr 34127
Drosophila melanogaster Invertebrates CA-IX CAIX ncbigene_synonym CAH9 43264
Drosophila melanogaster Invertebrates EGFR EGFR ncbigene_symbol Egfr 37455
Drosophila melanogaster Invertebrates RAS RAS ncbigene_symbol ras 43873
Drosophila melanogaster Invertebrates RAS RAS ncbigene_synonym Ras64B 38494
Drosophila melanogaster Invertebrates RAS RAS ncbigene_synonym Ras85D 41140
Drosophila melanogaster Invertebrates СзвмАРК) APK ncbigene_synonym Nplp1 38003
Drosophila melanogaster Invertebrates AKT AKT ncbigene_symbol Akt 41957
Drosophila melanogaster Invertebrates RAF RAF ncbigene_symbol Raf 31221
Drosophila melanogaster Invertebrates MAPKAPK2/3 MAPKAPK2 ncbigene_synonym MAPk-Ak2 44573
Drosophila melanogaster Invertebrates MAPK MAPK ncbigene_synonym MKP-4 32963
Drosophila melanogaster Invertebrates MAPK MAPK ncbigene_synonym p38b 34780
Drosophila melanogaster Invertebrates MAPK MAPK ncbigene_synonym rl 3354888
Drosophila melanogaster Invertebrates MEK MEK ncbigene_synonym Dsor1 31872
Drosophila melanogaster Invertebrates MEK MEK ncbigene_synonym Mtk 36708
Drosophila melanogaster Invertebrates ERK ERK ncbigene_synonym Erk7 31877
Homo sapiens Primates VHL VHL ncbigene_symbol VHL 7428
Homo sapiens Primates HIFA HIFA famplex_relations HIF1A 3091
Homo sapiens Primates HIFA HIFA famplex_relations EPAS1 2034
Homo sapiens Primates HIFA HIFA famplex_relations HIF3A 64344
Homo sapiens Primates HIF HIF famplex_relations ARNT 405
Homo sapiens Primates HIF HIF famplex_relations ARNT2 9915
Homo sapiens Primates HIF HIF famplex_relations BMAL1 406
Homo sapiens Primates MTOR MTOR ncbigene_symbol MTOR 2475
Homo sapiens Primates EPO EPO ncbigene_symbol EPO 2056
Homo sapiens Primates EPO EPO ncbigene_synonym TIMP1 7076
Homo sapiens Primates EPO EPO ncbigene_synonym EPX 8288
Homo sapiens Primates BNIP3 BNIP3 ncbigene_symbol BNIP3 664
Homo sapiens Primates GLUT1 GLUT1 ncbigene_synonym SLC2A1 6513
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMA1 5682
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMA2 5683
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMA3 5684
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMA4 5685
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMA5 5686
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMA6 5687
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMA7 5688
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMA8 143471
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB1 5689
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB10 5699
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB2 5690
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB3 5691
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB4 5692
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB5 5693
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB6 5694
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB7 5695
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB8 5696
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMB9 5698
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMC1 5700
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMC2 5701
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMC3 5702
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMC4 5704
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMC5 5705
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMC6 5706
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD1 5707
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD10 5716
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD11 5717
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD12 5718
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD13 5719
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD14 10213
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD2 5708
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD3 5709
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD4 5710
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD5 5711
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD6 9861
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD7 5713
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD8 5714
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMD9 5715
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSME1 5720
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSME2 5721
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSME3 10197
Homo sapiens Primates Proteasome PROTEASOME famplex_relations PSMF1 9491
Homo sapiens Primates Proteasome PROTEASOME famplex_relations SEM1 7979
Homo sapiens Primates Proteasome PROTEASOME famplex_relations USP5 8078
Homo sapiens Primates TGFA TGFA ncbigene_symbol TGFA 7039
Homo sapiens Primates VEGF VEGF ncbigene_synonym VEGFA 7422
Homo sapiens Primates VEGF VEGF famplex_relations VEGFB 7423
Homo sapiens Primates VEGF VEGF famplex_relations VEGFC 7424
Homo sapiens Primates VEGF VEGF famplex_relations VEGFD 2277
Homo sapiens Primates VEGF VEGF famplex_relations PGF 5228
Homo sapiens Primates PDGF PDGF famplex_relations PDGFA 5154
Homo sapiens Primates PDGF PDGF famplex_relations PDGFB 5155
Homo sapiens Primates PDGF PDGF famplex_relations PDGFC 56034
Homo sapiens Primates PDGF PDGF famplex_relations PDGFD 80310
Homo sapiens Primates CA-IX CAIX ncbigene_synonym CA9 768
Homo sapiens Primates EGFR EGFR ncbigene_symbol EGFR 1956
Homo sapiens Primates VEGFR VEGFR ncbigene_synonym KDR 3791
Homo sapiens Primates VEGFR VEGFR famplex_relations FLT1 2321
Homo sapiens Primates VEGFR VEGFR famplex_relations FLT4 2324
Homo sapiens Primates PDGFR. PDGFR ncbigene_synonym PDGFRB 5159
Homo sapiens Primates PDGFR. PDGFR famplex_relations PDGFRA 5156
Homo sapiens Primates RAS RAS famplex_relations KRAS 3845
Homo sapiens Primates RAS RAS famplex_relations HRAS 3265
Homo sapiens Primates RAS RAS famplex_relations NRAS 4893
Homo sapiens Primates AKT AKT ncbigene_synonym AKT1 207
Homo sapiens Primates AKT AKT famplex_relations AKT2 208
Homo sapiens Primates AKT AKT famplex_relations AKT3 10000
Homo sapiens Primates RAF RAF ncbigene_synonym ZHX2 22882
Homo sapiens Primates RAF RAF famplex_relations ARAF 369
Homo sapiens Primates RAF RAF famplex_relations BRAF 673
Homo sapiens Primates RAF RAF famplex_relations RAF1 5894
Homo sapiens Primates MAPKAPK2/3 MAPKAPK2 ncbigene_symbol MAPKAPK2 9261
Homo sapiens Primates MAPKAPK2/3 MAPKAPK3 ncbigene_symbol MAPKAPK3 7867
Homo sapiens Primates MAPK MAPK famplex_relations MAPK1 5594
Homo sapiens Primates MAPK MAPK famplex_relations MAPK3 5595
Homo sapiens Primates MAPK MAPK famplex_relations MAPK11 5600
Homo sapiens Primates MAPK MAPK famplex_relations MAPK12 6300
Homo sapiens Primates MAPK MAPK famplex_relations MAPK13 5603
Homo sapiens Primates MAPK MAPK famplex_relations MAPK14 1432
Homo sapiens Primates MAPK MAPK famplex_relations MAPK8 5599
Homo sapiens Primates MAPK MAPK famplex_relations MAPK9 5601
Homo sapiens Primates MAPK MAPK famplex_relations MAPK10 5602
Homo sapiens Primates MEK MEK ncbigene_synonym MAP2K7 5609
Homo sapiens Primates MEK MEK famplex_relations MAP2K1 5604
Homo sapiens Primates MEK MEK famplex_relations MAP2K2 5605
Homo sapiens Primates ERK ERK ncbigene_synonym EPHB2 2048

Chemical mentions

Word Match MeSH Name ChEBI
Temsirolimus Temsirolimus mesh:C401859 temsirolimus chebi:79699

Disease mentions

Word Match MeSH Name DOID
Cancer NA
Cardiomyopathy NA
Lung cancer NA
Noonan syndrome NA