Nephronophthisis: Disease Mechanisms of a Ciliopathy
"Cystoproteins” are proteins of genes mutated in cystic kidney diseases of humans, mice, or zebrafish. Depending on cell cycle stage, cystoproteins are localized at different subcellular organelles (shown in grey), including primary cilia, basal bodies, endoplasmic reticulum, the mitotic spindle, centrosomes, adherens junctions or focal adhesions. Arrows in the primary cilium indicate the direction of anterograde transport along the microtubule system mediated by kinesin-2 and retrograde transport by cytoplasmic dynein 1b. A) Most nephrocystins (blue) are located at cilia, the basal body, and centrosome in a cell cycle dependent manner. NPHP1 is also at the transition zone, focal adhesions and adherens junctions. B) Sensory cilia perceive and process cell external signals, and “cystoproteins” are involved in signaling mechanisms downstream of cilial signal recognition. Downstream of cilia (pink), Wnt signaling () and hedgehog signaling () play a role in planar cell polarity, which is mediated (C) partially through orientation of centrosomes and the mitotic spindle poles (). D) Cilia-dependent mechanisms of planar cell polarity seem to be the central to the pathogenesis of the ciliopathies, the most prominent of which are listed on the right. Wht, the Wnti signaling pathway; Shh, the sonic hedgehog signaling pathway.
Publication
Nephronophthisis: Disease Mechanisms of a Ciliopathy. ()
Friedhelm Hildebrandt, et al. J Am Soc Nephrol. ;20(1):23-35. Figure: F4.
All organisms
Homo sapiens
Danio rerio
Organism
Group
Word
Match
Source
NCBI Symbol
NCBI ID
Homo sapiens
Primates
nal-
NAL
ncbigene_synonym
NPL
80896
Homo sapiens
Primates
PC1,2
PC2
ncbigene_synonym
KRT6B
3854
Homo sapiens
Primates
PC1,2
PC2
ncbigene_synonym
KRT17
3872
Homo sapiens
Primates
PC1,2
PC2
ncbigene_synonym
PCSK2
5126
Homo sapiens
Primates
PC1,2
PC2
ncbigene_synonym
PKD2
5311
Homo sapiens
Primates
PC1,2
PC2
ncbigene_synonym
CBX4
8535
Homo sapiens
Primates
PC1,2
PC1
ncbigene_synonym
KRT16
3868
Homo sapiens
Primates
PC1,2
PC1
ncbigene_synonym
PCSK1
5122
Homo sapiens
Primates
PC1,2
PC1
ncbigene_synonym
ENPP1
5167
Homo sapiens
Primates
PC1,2
PC1
ncbigene_synonym
PKD1
5310
Homo sapiens
Primates
PC1,2
PC1
ncbigene_synonym
TPD52
7163
Homo sapiens
Primates
NPHP1
NPHP1
ncbigene_symbol
NPHP1
4867
Homo sapiens
Primates
PKD
PKD
ncbigene_synonym
PRKD1
5587
Homo sapiens
Primates
NPHP2/
NPHP2
ncbigene_synonym
INVS
27130
Homo sapiens
Primates
NPHP3
NPHP3
ncbigene_symbol
NPHP3
27031
Homo sapiens
Primates
NPHP3
NPHP3
ncbigene_synonym
NPHP3-ACAD11
100532724
Homo sapiens
Primates
NPHP4
NPHP4
ncbigene_symbol
NPHP4
261734
Homo sapiens
Primates
Shh
SHH
ncbigene_symbol
SHH
6469
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT1
7471
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT2
7472
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT2B
7482
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT3
7473
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT3A
89780
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT4
54361
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT6
7475
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT7A
7476
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT7B
7477
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT8A
7478
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT8B
7479
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT9A
7483
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT9B
7484
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT10A
80326
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT10B
7480
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT11
7481
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT16
51384
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT5A
7474
Homo sapiens
Primates
Wnt
WNT
famplex_relations
WNT5B
81029
Homo sapiens
Primates
NPHP5
NPHP5
ncbigene_synonym
IQCB1
9657
Homo sapiens
Primates
NPHP6
NPHP6
ncbigene_synonym
CEP290
80184
Homo sapiens
Primates
PACS-1
PACS1
ncbigene_symbol
PACS1
55690
Homo sapiens
Primates
BBS
BBS
ncbigene_synonym
BBS2
583
Homo sapiens
Primates
NPHP7/
NPHP7
ncbigene_synonym
GLIS2
84662
Homo sapiens
Primates
NPHP8/
NPHP8
ncbigene_synonym
RPGRIP1L
23322
Homo sapiens
Primates
MKS
MKS
ncbigene_synonym
MKKS
8195
Homo sapiens
Primates
MKS
MKS
ncbigene_synonym
MKS1
54903
Homo sapiens
Primates
Ocal/
OCA1
ncbigene_synonym
TYR
7299
Homo sapiens
Primates
NPHP9/
NPHP9
ncbigene_synonym
NEK8
284086
Homo sapiens
Primates
IFT80
IFT80
ncbigene_symbol
IFT80
57560
Danio rerio
Vertebrates
PC1,2
PC1
ncbigene_synonym
cbx2
327291
Danio rerio
Vertebrates
Receptor
RECEPTOR
ncbigene_synonym
kita
30256
Danio rerio
Vertebrates
Receptor
RECEPTOR
ncbigene_synonym
ngfra
100535003
Danio rerio
Vertebrates
NPHP1
NPHP1
ncbigene_symbol
nphp1
100002391
Danio rerio
Vertebrates
NPHP3
NPHP3
ncbigene_symbol
nphp3
562601
Danio rerio
Vertebrates
NPHP4
NPHP4
ncbigene_symbol
nphp4
560234
Danio rerio
Vertebrates
Shh
SHH
ncbigene_synonym
shha
30269
Danio rerio
Vertebrates
NPHP6
NPHP6
ncbigene_synonym
cep290
560588
Danio rerio
Vertebrates
PACS-1
PACS1
ncbigene_synonym
pacs1a
569034
Danio rerio
Vertebrates
RPGRIP1L
RPGRIP1L
ncbigene_symbol
rpgrip1l
557688
Danio rerio
Vertebrates
NEK8
NEK8
ncbigene_symbol
nek8
171094
Danio rerio
Vertebrates
IFT80
IFT80
ncbigene_symbol
ift80
494082
Word
Match
MeSH
Name
ChEBI
Disease mentions
Word
Match
MeSH
Name
DOID
Nephronophthisis
NA