CIE and CDE pathways showing lipid content and regulatory molecules

Schematic illustration of CIE and CDE pathways showing lipid content and regulatory molecules. Constitutive CIE vesicles contain cargo such as MHCI (blue bars) while CDE vesicles contain cargo such as transferrin receptor (green bars). CIE vesicles lose PIP2 and may acquire Rab5 prior to fusion with Rab5, EEA1-positive, “classical” early endosome (EE) containing CDE cargo. From here, CIE cargo may go on to late endosomes (LE) and lysosomes for degradation. CIE cargo destined for recycling reaches the endosomal recycling compartment (ERC) either directly or after fusion with “classical” EE and is recycled back out to the PM via tubular membranes that do not contain CDE cargo. Recycling back out to the PM requires Rab22 and probably Rab8 for tubule formation and Rab11, Arf6, Par 3, Par6, Cdc42 and actin for fusion back to the PM. Activation of Arf6, Ras and Src leads to PM ruffling and macropinocytosis that alters the architecture of the CIE. Macropinosomes mature from PIP2/PIP3-containing by loss of PIP2, acquisition of Rab5 and loss of PIP3. The bulk of the macropinosome membrane is recycled back out to the PM using CIE pathway recycling components.
CIE and CDE pathways showing lipid content and regulatory molecules

Publication

Clathrin-Independent Endocytosis: A unique Platform for Cell Signaling and PM Remodeling. () Julie G. Donaldson, et al. Cell Signal. ;21(1):1-6. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Drosophila melanogaster Invertebrates Arf6,Ras,Src RAS ncbigene_symbol ras 43873
Drosophila melanogaster Invertebrates Arf6,Ras,Src RAS ncbigene_synonym Ras64B 38494
Drosophila melanogaster Invertebrates Arf6,Ras,Src RAS ncbigene_synonym Ras85D 41140
Drosophila melanogaster Invertebrates Arf6,Ras,Src SRC ncbigene_synonym Src42A 35524
Drosophila melanogaster Invertebrates Arf6,Ras,Src SRC ncbigene_synonym Csk 41398
Drosophila melanogaster Invertebrates Arf6,Ras,Src SRC ncbigene_synonym Src64B 48973
Drosophila melanogaster Invertebrates Arf6,Ras,Src ARF6 ncbigene_symbol Arf6 36699
Drosophila melanogaster Invertebrates Rabl1 RAB11 ncbigene_symbol Rab11 42501
Drosophila melanogaster Invertebrates PLD PLD ncbigene_symbol Pld 35554
Drosophila melanogaster Invertebrates Par3,6 PAR6 ncbigene_symbol par-6 32752
Drosophila melanogaster Invertebrates Par3,6 PAR3 ncbigene_synonym baz 32703
Drosophila melanogaster Invertebrates Cdc42 CDC42 ncbigene_symbol Cdc42 32981
Drosophila melanogaster Invertebrates actin ACTIN ncbigene_synonym Act5C 31521
Drosophila melanogaster Invertebrates actin ACTIN ncbigene_synonym Act42A 35526
Drosophila melanogaster Invertebrates actin ACTIN ncbigene_synonym Act57B 37368
Drosophila melanogaster Invertebrates actin ACTIN ncbigene_synonym Act79B 40444
Drosophila melanogaster Invertebrates actin ACTIN ncbigene_synonym Act88F 41885
Drosophila melanogaster Invertebrates actin ACTIN ncbigene_synonym Act87E 48632
Drosophila melanogaster Invertebrates EE EE ncbigene_symbol ee 45290
Drosophila melanogaster Invertebrates loss LOS ncbigene_synonym mid 33770
Drosophila melanogaster Invertebrates Rab5? RAB5 ncbigene_symbol Rab5 33418
Drosophila melanogaster Invertebrates Rab8 RAB8 ncbigene_symbol Rab8 40168
Homo sapiens Primates Clathrin-dependent CLATHRIN famplex_relations CLTA 1211
Homo sapiens Primates Clathrin-dependent CLATHRIN famplex_relations CLTB 1212
Homo sapiens Primates Clathrin-dependent CLATHRIN famplex_relations CLTC 1213
Homo sapiens Primates Arf6,Ras,Src RAS famplex_relations KRAS 3845
Homo sapiens Primates Arf6,Ras,Src RAS famplex_relations HRAS 3265
Homo sapiens Primates Arf6,Ras,Src RAS famplex_relations NRAS 4893
Homo sapiens Primates Arf6,Ras,Src SRC ncbigene_symbol SRC 6714
Homo sapiens Primates Arf6,Ras,Src SRC famplex_relations FGR 2268
Homo sapiens Primates Arf6,Ras,Src SRC famplex_relations FYN 2534
Homo sapiens Primates Arf6,Ras,Src SRC famplex_relations YES1 7525
Homo sapiens Primates Arf6,Ras,Src ARF6 ncbigene_symbol ARF6 382
Homo sapiens Primates PLD PLD ncbigene_synonym GPLD1 2822
Homo sapiens Primates PLD PLD famplex_relations PLD1 5337
Homo sapiens Primates PLD PLD famplex_relations PLD2 5338
Homo sapiens Primates PLD PLD famplex_relations PLD3 23646
Homo sapiens Primates PLD PLD famplex_relations PLD4 122618
Homo sapiens Primates PLD PLD famplex_relations PLD5 200150
Homo sapiens Primates PLD PLD famplex_relations PLD6 201164
Homo sapiens Primates Par3,6 PAR6 ncbigene_synonym PARD6A 50855
Homo sapiens Primates Par3,6 PAR6 ncbigene_synonym PWAR6 100506965
Homo sapiens Primates Par3,6 PAR3 ncbigene_synonym F2RL2 2151
Homo sapiens Primates Par3,6 PAR3 ncbigene_synonym PARD3 56288
Homo sapiens Primates Cdc42 CDC42 ncbigene_symbol CDC42 998
Homo sapiens Primates actin ACTIN famplex_relations ACTA1 58
Homo sapiens Primates actin ACTIN famplex_relations ACTA2 59
Homo sapiens Primates actin ACTIN famplex_relations ACTB 60
Homo sapiens Primates actin ACTIN famplex_relations ACTC1 70
Homo sapiens Primates actin ACTIN famplex_relations ACTG1 71
Homo sapiens Primates actin ACTIN famplex_relations ACTG2 72
Homo sapiens Primates Rab5? RAB5 ncbigene_synonym RAB5A 5868
Homo sapiens Primates EHD3 EHD3 ncbigene_symbol EHD3 30845
Homo sapiens Primates Rab8 RAB8 ncbigene_synonym RAB8A 4218

Chemical mentions

Word Match MeSH Name ChEBI
Cholesterol Cholesterol mesh:D002784 cholesterol chebi:16113

Disease mentions

Word Match MeSH Name DOID
Cancer NA