Genes that contain the 100 most differentially methylated CpG sites between normal and lung cancer tissue samples (p-value < 0.005)

Pathway analysis of genes that contain the 100 most differentially methylated CpG sites between normal and lung cancer tissue samples (p-value < 0.005). Genes that do not connect to other genes are not shown in this figure.
Genes that contain the 100 most differentially methylated CpG sites between normal and lung cancer tissue samples (p-value < 0.005)
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PMC
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Publication

Identification of a small optimal subset of CpG sites as bio-markers from high-throughput DNA methylation profiles. (2008) Hailong Meng, et al. BMC Bioinformatics. 2008;9:457-457. Figure: F4.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates TWIST TWIST ncbigene_synonym TWIST1 7291
Homo sapiens Primates HOXA11 HOXA11 ncbigene_symbol HOXA11 3207
Homo sapiens Primates MYOD1 MYOD1 ncbigene_symbol MYOD1 4654
Homo sapiens Primates IGF2AS IGF2AS ncbigene_symbol IGF2-AS 51214
Homo sapiens Primates NPY NPY ncbigene_symbol NPY 4852
Homo sapiens Primates CD2 CD2 ncbigene_symbol CD2 914
Homo sapiens Primates IGF2 IGF2 ncbigene_symbol IGF2 3481
Homo sapiens Primates SFTPA1 SFTPA1 ncbigene_symbol SFTPA1 653509
Homo sapiens Primates MAGEA1 MAGEA1 ncbigene_symbol MAGEA1 4100
Homo sapiens Primates PTPN6 PTPN6 ncbigene_symbol PTPN6 5777
Homo sapiens Primates TNF TNF ncbigene_symbol TNF 7124
Homo sapiens Primates CHGA CHGA ncbigene_symbol CHGA 1113
Homo sapiens Primates L13 L13 ncbigene_synonym RPL13 6137
Homo sapiens Primates L13 L13 ncbigene_synonym IGKV2-4 28929
Homo sapiens Primates L13 L13 ncbigene_synonym MRPL13 28998
Homo sapiens Primates L13 L13 ncbigene_synonym RNF135 84282
Homo sapiens Primates TP73 TP73 ncbigene_symbol TP73 7161
Homo sapiens Primates PENK PENK ncbigene_symbol PENK 5179
Homo sapiens Primates MOS MOS ncbigene_symbol MOS 4342
Homo sapiens Primates MOS MOS ncbigene_synonym MOCOS 55034
Homo sapiens Primates CFTR CFTR ncbigene_symbol CFTR 1080
Homo sapiens Primates HOXAS HOXAS ncbigene_synonym HOTAIR 100124700
Homo sapiens Primates WT1 WT1 ncbigene_symbol WT1 7490
Homo sapiens Primates HTR2A HTR2A ncbigene_symbol HTR2A 3356
Homo sapiens Primates NCL NCL ncbigene_symbol NCL 4691
Homo sapiens Primates NCL NCL ncbigene_synonym DNAJC5 80331
Homo sapiens Primates POMC POMC ncbigene_symbol POMC 5443
Homo sapiens Primates RASGRF RASGRF famplex_relations RASGRF1 5923
Homo sapiens Primates RASGRF RASGRF famplex_relations RASGRF2 5924
Homo sapiens Primates TERT TERT ncbigene_symbol TERT 7015
Homo sapiens Primates NEFL NEFL ncbigene_symbol NEFL 4747
Homo sapiens Primates GALR1 GALR1 ncbigene_symbol GALR1 2587
Mus musculus Rodents TWIST TWIST ncbigene_synonym Twist1 22160
Mus musculus Rodents HOXA11 HOXA11 ncbigene_symbol Hoxa11 15396
Mus musculus Rodents MYOD1 MYOD1 ncbigene_symbol Myod1 17927
Mus musculus Rodents IGF2AS IGF2AS ncbigene_synonym Igf2os 111975
Mus musculus Rodents NPY NPY ncbigene_symbol Npy 109648
Mus musculus Rodents CD2 CD2 ncbigene_symbol Cd2 12481
Mus musculus Rodents CD2 CD2 ncbigene_synonym Ccnd2 12444
Mus musculus Rodents IGF2 IGF2 ncbigene_symbol Igf2 16002
Mus musculus Rodents IGF2 IGF2 ncbigene_synonym D7Zem1 27547
Mus musculus Rodents IGF2 IGF2 ncbigene_synonym D7Zem3 27548
Mus musculus Rodents IGF2 IGF2 ncbigene_synonym D7Zem2 27549
Mus musculus Rodents SFTPA1 SFTPA1 ncbigene_symbol Sftpa1 20387
Mus musculus Rodents MAGEA1 MAGEA1 ncbigene_symbol Magea1 17137
Mus musculus Rodents PTPN6 PTPN6 ncbigene_symbol Ptpn6 15170
Mus musculus Rodents TNF TNF ncbigene_symbol Tnf 21926
Mus musculus Rodents CHGA CHGA ncbigene_symbol Chga 12652
Mus musculus Rodents L13 L13 ncbigene_synonym Skull20 114728
Mus musculus Rodents L13 L13 ncbigene_synonym Rpl13 270106
Mus musculus Rodents TP73 TP73 ncbigene_synonym Trp73 22062
Mus musculus Rodents PENK PENK ncbigene_symbol Penk 18619
Mus musculus Rodents PENK PENK ncbigene_synonym Penk-rs 110182
Mus musculus Rodents MOS MOS ncbigene_symbol Mos 17451
Mus musculus Rodents MOS MOS ncbigene_synonym Mocos 68591
Mus musculus Rodents CFTR CFTR ncbigene_symbol Cftr 12638
Mus musculus Rodents WT1 WT1 ncbigene_symbol Wt1 22431
Mus musculus Rodents HTR2A HTR2A ncbigene_symbol Htr2a 15558
Mus musculus Rodents NCL NCL ncbigene_symbol Ncl 17975
Mus musculus Rodents POMC POMC ncbigene_symbol Pomc 18976
Mus musculus Rodents TERT TERT ncbigene_symbol Tert 21752
Mus musculus Rodents NEFL NEFL ncbigene_symbol Nefl 18039
Mus musculus Rodents GALR1 GALR1 ncbigene_symbol Galr1 14427
Danio rerio Vertebrates HOXA11 HOXA11 ncbigene_synonym hoxa11b 30382
Danio rerio Vertebrates HOXA11 HOXA11 ncbigene_synonym hoxc11b 570925
Danio rerio Vertebrates MYOD1 MYOD1 ncbigene_symbol myod1 30513
Danio rerio Vertebrates NPY NPY ncbigene_symbol npy 30281
Danio rerio Vertebrates CD2 CD2 ncbigene_synonym ighv1-1 378753
Danio rerio Vertebrates CD2 CD2 ncbigene_synonym si:ch211-132g1.1 101884448
Danio rerio Vertebrates IGF2 IGF2 ncbigene_synonym igf2a 30710
Danio rerio Vertebrates PTPN6 PTPN6 ncbigene_symbol ptpn6 335573
Danio rerio Vertebrates TNF TNF ncbigene_synonym tnfrsfa 114461
Danio rerio Vertebrates TNF TNF ncbigene_synonym tnfb 554167
Danio rerio Vertebrates CHGA CHGA ncbigene_symbol chga 450039
Danio rerio Vertebrates TP73 TP73 ncbigene_symbol tp73 368221
Danio rerio Vertebrates PENK PENK ncbigene_synonym penkb 360136
Danio rerio Vertebrates MOS MOS ncbigene_symbol mos 795517
Danio rerio Vertebrates MOS MOS ncbigene_synonym mocos 100331902
Danio rerio Vertebrates CFTR CFTR ncbigene_symbol cftr 559080
Danio rerio Vertebrates WT1 WT1 ncbigene_synonym wt1a 30245
Danio rerio Vertebrates WT1 WT1 ncbigene_synonym wt1b 568416
Danio rerio Vertebrates HTR2A HTR2A ncbigene_synonym htr2aa 560808
Danio rerio Vertebrates NCL NCL ncbigene_symbol ncl 767714
Danio rerio Vertebrates POMC POMC ncbigene_synonym pomca 353221
Danio rerio Vertebrates TERT TERT ncbigene_symbol tert 796551
Danio rerio Vertebrates NEFL NEFL ncbigene_synonym neflb 664698
Danio rerio Vertebrates GALR1 GALR1 ncbigene_synonym galr1a 567820

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID