Oxidative and alkylation DNA damage is effectively repaired by the DNA BER pathway
Oxidative and alkylation DNA damage is effectively repaired by the DNA BER pathway. This is a very simplified drawing of the DNA BER pathway. For a more detailed discussion, see Fishel et al. (). (A) Damaged bases (in this case an N3-adenine) are removed by glycosylases that result in baseless or apurinic (AP) sites. Ape1 acts on AP sites, produces a nick that allows É-polymerase to insert the correct base and DNA ligase to connect the DNA backbone. (B) In addition to its repair function, Ape1 also serves as a redox factor maintaining transcription factors in an active reduced state. Some example targets are shown. Therefore, the protection of Ape1 from DNA damage may be twofold: directly through its DNA-repair function and indirectly through its redox activity by enabling transcription factors to bind to DNA and respond to the DNA damage. Lack of Ape1 activity may lead to cell death.
Publication
Role of the Multifunctional DNA Repair and Redox Signaling Protein Ape1/Ref-1 in Cancer and Endothelial Cells: Small-Molecule Inhibition of the Redox Function of Ape1. (2008)
Meihua Luo, et al. Antioxid Redox Signal. 2008 Nov;10(11):1853-1867. Figure: F1.
All organisms
Mus musculus
Homo sapiens
Rattus norvegicus
Ovis aries
Bos taurus
Danio rerio
Drosophila melanogaster
Organism
Group
Word
Match
Source
NCBI Symbol
NCBI ID
Mus musculus
Rodents
AP-1
AP-1
ncbigene_synonym
Jun
16476
Mus musculus
Rodents
p53
P53
ncbigene_synonym
Trp53
22059
Mus musculus
Rodents
NFKB
NFKB
ncbigene_synonym
Nfkb1
18033
Mus musculus
Rodents
HLF
HLF
ncbigene_symbol
Hlf
217082
Mus musculus
Rodents
HLF
HLF
ncbigene_synonym
Epas1
13819
Mus musculus
Rodents
Nth1,
NTH1
ncbigene_synonym
Nthl1
18207
Mus musculus
Rodents
Nth1,
NTH1
ncbigene_synonym
n-THatg1
102467538
Mus musculus
Rodents
Ogg1,
OGG1
ncbigene_symbol
Ogg1
18294
Mus musculus
Rodents
NEIL1)
NEIL1
ncbigene_symbol
Neil1
72774
Mus musculus
Rodents
(MPG,
MPG
ncbigene_symbol
Mpg
268395
Mus musculus
Rodents
HIF-1a.
HIF1A
ncbigene_symbol
Hif1a
15251
Mus musculus
Rodents
CREB
CREB
ncbigene_synonym
Creb1
12912
Mus musculus
Rodents
Ape1/Ref-1
REF-1
ncbigene_synonym
Apex1
11792
Mus musculus
Rodents
ATF
ATF
ncbigene_synonym
Gdnf
14573
Mus musculus
Rodents
Egr-1
EGR-1
ncbigene_synonym
Egr1
13653
Mus musculus
Rodents
PAX
PAX
ncbigene_synonym
Pxn
19303
Mus musculus
Rodents
AP
AP
ncbigene_symbol
ap
11763
Mus musculus
Rodents
T-G
TG
ncbigene_symbol
Tg
21819
Mus musculus
Rodents
A--C
AC
ncbigene_symbol
ac
11358
Homo sapiens
Primates
AP-1
AP-1
ncbigene_synonym
FOS
2353
Homo sapiens
Primates
AP-1
AP-1
ncbigene_synonym
FOSB
2354
Homo sapiens
Primates
AP-1
AP-1
ncbigene_synonym
JUN
3725
Homo sapiens
Primates
AP-1
AP-1
ncbigene_synonym
JUNB
3726
Homo sapiens
Primates
AP-1
AP-1
ncbigene_synonym
JUND
3727
Homo sapiens
Primates
p53
P53
ncbigene_synonym
TP53
7157
Homo sapiens
Primates
p53
P53
famplex_relations
TP63
8626
Homo sapiens
Primates
p53
P53
famplex_relations
TP73
7161
Homo sapiens
Primates
NFKB
NFKB
ncbigene_synonym
NFKB1
4790
Homo sapiens
Primates
NFKB
NFKB
famplex_relations
RELA
5970
Homo sapiens
Primates
NFKB
NFKB
famplex_relations
RELB
5971
Homo sapiens
Primates
NFKB
NFKB
famplex_relations
REL
5966
Homo sapiens
Primates
NFKB
NFKB
famplex_relations
NFKB2
4791
Homo sapiens
Primates
HLF
HLF
ncbigene_symbol
HLF
3131
Homo sapiens
Primates
HLF
HLF
ncbigene_synonym
EPAS1
2034
Homo sapiens
Primates
Nth1,
NTH1
ncbigene_synonym
NTHL1
4913
Homo sapiens
Primates
Ogg1,
OGG1
ncbigene_symbol
OGG1
4968
Homo sapiens
Primates
NEIL1)
NEIL1
ncbigene_symbol
NEIL1
79661
Homo sapiens
Primates
(MPG,
MPG
ncbigene_symbol
MPG
4350
Homo sapiens
Primates
HIF-1a.
HIF1A
ncbigene_symbol
HIF1A
3091
Homo sapiens
Primates
CREB
CREB
ncbigene_synonym
CREB1
1385
Homo sapiens
Primates
CREB
CREB
famplex_relations
CREB3
10488
Homo sapiens
Primates
CREB
CREB
famplex_relations
CREB5
9586
Homo sapiens
Primates
CREB
CREB
famplex_relations
CREB3L1
90993
Homo sapiens
Primates
CREB
CREB
famplex_relations
CREB3L2
64764
Homo sapiens
Primates
CREB
CREB
famplex_relations
CREB3L3
84699
Homo sapiens
Primates
CREB
CREB
famplex_relations
CREB3L4
148327
Homo sapiens
Primates
CREB
CREB
famplex_relations
CREM
1390
Homo sapiens
Primates
CREB
CREB
famplex_relations
ATF1
466
Homo sapiens
Primates
CREB
CREB
famplex_relations
ATF2
1386
Homo sapiens
Primates
Ape1/Ref-1
APE1
ncbigene_synonym
APEX1
328
Homo sapiens
Primates
Ref-1
REF1
ncbigene_synonym
TEAD1
7003
Homo sapiens
Primates
Ref-1
REF1
ncbigene_synonym
TFPI2
7980
Homo sapiens
Primates
ATF
ATF
ncbigene_synonym
GDNF
2668
Homo sapiens
Primates
ATF
ATF
ncbigene_synonym
PLAU
5328
Homo sapiens
Primates
Egr-1
EGR1
ncbigene_symbol
EGR1
1958
Homo sapiens
Primates
NF-Y
NFY
famplex_relations
NFYA
4800
Homo sapiens
Primates
NF-Y
NFY
famplex_relations
NFYB
4801
Homo sapiens
Primates
NF-Y
NFY
famplex_relations
NFYC
4802
Homo sapiens
Primates
T-G
TG
ncbigene_symbol
TG
7038
Homo sapiens
Primates
A-T-C
ATC
ncbigene_synonym
ATM
472
Rattus norvegicus
Rodents
p53
P53
ncbigene_synonym
Tp53
24842
Rattus norvegicus
Rodents
NFKB
NFKB
ncbigene_synonym
Nfkb1
81736
Rattus norvegicus
Rodents
NFKB
NFKB
ncbigene_synonym
Rela
309165
Rattus norvegicus
Rodents
HLF
HLF
ncbigene_symbol
Hlf
690286
Rattus norvegicus
Rodents
HLF
HLF
ncbigene_synonym
Epas1
29452
Rattus norvegicus
Rodents
Nth1,
NTH1
ncbigene_synonym
Nthl1
29541
Rattus norvegicus
Rodents
Ogg1,
OGG1
ncbigene_symbol
Ogg1
81528
Rattus norvegicus
Rodents
NEIL1)
NEIL1
ncbigene_symbol
Neil1
367090
Rattus norvegicus
Rodents
(MPG,
MPG
ncbigene_symbol
Mpg
24561
Rattus norvegicus
Rodents
HIF-1a.
HIF1A
ncbigene_symbol
Hif1a
29560
Rattus norvegicus
Rodents
CREB
CREB
ncbigene_synonym
Creb1
81646
Rattus norvegicus
Rodents
Ape1/Ref-1
REF-1
ncbigene_synonym
Apex1
79116
Rattus norvegicus
Rodents
Egr-1
EGR1
ncbigene_symbol
Egr1
24330
Rattus norvegicus
Rodents
T-G
TG
ncbigene_symbol
Tg
24826
Ovis aries
Mammals
p53
P53
ncbigene_synonym
TP53
443421
Ovis aries
Mammals
NFKB
NFKB
ncbigene_synonym
NFKB2
443119
Ovis aries
Mammals
HLF
HLF
ncbigene_symbol
HLF
100192429
Ovis aries
Mammals
Ogg1,
OGG1
ncbigene_symbol
OGG1
101104015
Ovis aries
Mammals
NEIL1)
NEIL1
ncbigene_symbol
NEIL1
101106367
Ovis aries
Mammals
(MPG,
MPG
ncbigene_symbol
MPG
101120377
Ovis aries
Mammals
HIF-1a.
HIF1A
ncbigene_symbol
HIF1A
443519
Ovis aries
Mammals
CREB
CREB
ncbigene_synonym
CREB1
443118
Ovis aries
Mammals
Egr-1
EGR1
ncbigene_symbol
EGR1
443547
Ovis aries
Mammals
T-G
TG
ncbigene_symbol
TG
101122868
Bos taurus
Mammals
HLF
HLF
ncbigene_symbol
HLF
516069
Bos taurus
Mammals
Ogg1,
OGG1
ncbigene_symbol
OGG1
520497
Bos taurus
Mammals
NEIL1)
NEIL1
ncbigene_symbol
NEIL1
513458
Bos taurus
Mammals
(MPG,
MPG
ncbigene_symbol
MPG
618306
Bos taurus
Mammals
HIF-1a.
HIF1A
ncbigene_symbol
HIF1A
281814
Bos taurus
Mammals
CREB
CREB
ncbigene_synonym
CREB1
281713
Bos taurus
Mammals
Ape1/Ref-1
REF-1
ncbigene_synonym
APEX1
281630
Bos taurus
Mammals
Egr-1
EGR1
ncbigene_symbol
EGR1
407125
Bos taurus
Mammals
T-G
TG
ncbigene_symbol
TG
280706
Danio rerio
Vertebrates
p53
P53
ncbigene_synonym
tp53
30590
Danio rerio
Vertebrates
Ogg1,
OGG1
ncbigene_symbol
ogg1
791194
Danio rerio
Vertebrates
NEIL1)
NEIL1
ncbigene_symbol
neil1
393253
Danio rerio
Vertebrates
(MPG,
MPG
ncbigene_symbol
mpg
566516
Danio rerio
Vertebrates
HIF-1a.
HIF1A
ncbigene_synonym
hif1ab
393202
Danio rerio
Vertebrates
Egr-1
EGR1
ncbigene_symbol
egr1
30498
Danio rerio
Vertebrates
T-G
TG
ncbigene_symbol
tg
567631
Drosophila melanogaster
Invertebrates
AP-1
AP-1
ncbigene_synonym
AP-1gamma
31842
Drosophila melanogaster
Invertebrates
AP-1
AP-1
ncbigene_synonym
Jra
36057
Drosophila melanogaster
Invertebrates
AP-1
AP-1
ncbigene_synonym
kay
3772082
Drosophila melanogaster
Invertebrates
p53
P53
ncbigene_symbol
p53
2768677
Drosophila melanogaster
Invertebrates
p53
P53
ncbigene_synonym
betaTub60D
37888
Drosophila melanogaster
Invertebrates
p53
P53
ncbigene_synonym
hth
41273
Drosophila melanogaster
Invertebrates
NFKB
NFKB
ncbigene_synonym
Dif
35045
Drosophila melanogaster
Invertebrates
NFKB
NFKB
ncbigene_synonym
dl
35047
Drosophila melanogaster
Invertebrates
NFKB
NFKB
ncbigene_synonym
Rel
41087
Drosophila melanogaster
Invertebrates
-E-A-AT-
EAAT
ncbigene_synonym
Eaat2
33247
Drosophila melanogaster
Invertebrates
-E-A-AT-
EAAT
ncbigene_synonym
Eaat1
34251
Drosophila melanogaster
Invertebrates
Nth1,
NTH1
ncbigene_synonym
CG9272
35365
Drosophila melanogaster
Invertebrates
Ogg1,
OGG1
ncbigene_symbol
Ogg1
31806
Drosophila melanogaster
Invertebrates
HIF-1a.
HIF1A
ncbigene_synonym
sima
43580
Drosophila melanogaster
Invertebrates
CREB
CREB
ncbigene_synonym
CrebB
32817
Drosophila melanogaster
Invertebrates
CREB
CREB
ncbigene_synonym
CrebA
39682
Drosophila melanogaster
Invertebrates
Ape1/Ref-1
REF1
ncbigene_symbol
Ref1
44029
Drosophila melanogaster
Invertebrates
PAX
PAX
ncbigene_symbol
Pax
35215
Drosophila melanogaster
Invertebrates
AP
AP
ncbigene_symbol
ap
35509
Drosophila melanogaster
Invertebrates
T-G
TG
ncbigene_symbol
Tg
34093
Drosophila melanogaster
Invertebrates
A-T-C
ATC
ncbigene_synonym
Srpk79D
40461
Drosophila melanogaster
Invertebrates
and
AND
ncbigene_synonym
CkIIbeta
32132
Drosophila melanogaster
Invertebrates
and
AND
ncbigene_synonym
Andorra
32798
Drosophila melanogaster
Invertebrates
and
AND
ncbigene_synonym
Anp
43595
Drosophila melanogaster
Invertebrates
and
AND
ncbigene_synonym
Acam
44913
Drosophila melanogaster
Invertebrates
A--C
AC
ncbigene_symbol
ac
30981
Word
Match
MeSH
Name
ChEBI
Disease mentions
Word
Match
MeSH
Name
DOID
Cancer
NA