Oxidative and alkylation DNA damage is effectively repaired by the DNA BER pathway

Oxidative and alkylation DNA damage is effectively repaired by the DNA BER pathway. This is a very simplified drawing of the DNA BER pathway. For a more detailed discussion, see Fishel et al. (). (A) Damaged bases (in this case an N3-adenine) are removed by glycosylases that result in baseless or apurinic (AP) sites. Ape1 acts on AP sites, produces a nick that allows É-polymerase to insert the correct base and DNA ligase to connect the DNA backbone. (B) In addition to its repair function, Ape1 also serves as a redox factor maintaining transcription factors in an active reduced state. Some example targets are shown. Therefore, the protection of Ape1 from DNA damage may be twofold: directly through its DNA-repair function and indirectly through its redox activity by enabling transcription factors to bind to DNA and respond to the DNA damage. Lack of Ape1 activity may lead to cell death.
Oxidative and alkylation DNA damage is effectively repaired by the DNA BER pathway

Publication

Role of the Multifunctional DNA Repair and Redox Signaling Protein Ape1/Ref-1 in Cancer and Endothelial Cells: Small-Molecule Inhibition of the Redox Function of Ape1. (2008) Meihua Luo, et al. Antioxid Redox Signal. 2008 Nov;10(11):1853-1867. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Mus musculus Rodents AP-1 AP-1 ncbigene_synonym Jun 16476
Mus musculus Rodents p53 P53 ncbigene_synonym Trp53 22059
Mus musculus Rodents NFKB NFKB ncbigene_synonym Nfkb1 18033
Mus musculus Rodents HLF HLF ncbigene_symbol Hlf 217082
Mus musculus Rodents HLF HLF ncbigene_synonym Epas1 13819
Mus musculus Rodents Nth1, NTH1 ncbigene_synonym Nthl1 18207
Mus musculus Rodents Nth1, NTH1 ncbigene_synonym n-THatg1 102467538
Mus musculus Rodents Ogg1, OGG1 ncbigene_symbol Ogg1 18294
Mus musculus Rodents NEIL1) NEIL1 ncbigene_symbol Neil1 72774
Mus musculus Rodents (MPG, MPG ncbigene_symbol Mpg 268395
Mus musculus Rodents HIF-1a. HIF1A ncbigene_symbol Hif1a 15251
Mus musculus Rodents CREB CREB ncbigene_synonym Creb1 12912
Mus musculus Rodents Ape1/Ref-1 REF-1 ncbigene_synonym Apex1 11792
Mus musculus Rodents ATF ATF ncbigene_synonym Gdnf 14573
Mus musculus Rodents Egr-1 EGR-1 ncbigene_synonym Egr1 13653
Mus musculus Rodents PAX PAX ncbigene_synonym Pxn 19303
Mus musculus Rodents AP AP ncbigene_symbol ap 11763
Mus musculus Rodents T-G TG ncbigene_symbol Tg 21819
Mus musculus Rodents A--C AC ncbigene_symbol ac 11358
Homo sapiens Primates AP-1 AP-1 ncbigene_synonym FOS 2353
Homo sapiens Primates AP-1 AP-1 ncbigene_synonym FOSB 2354
Homo sapiens Primates AP-1 AP-1 ncbigene_synonym JUN 3725
Homo sapiens Primates AP-1 AP-1 ncbigene_synonym JUNB 3726
Homo sapiens Primates AP-1 AP-1 ncbigene_synonym JUND 3727
Homo sapiens Primates p53 P53 ncbigene_synonym TP53 7157
Homo sapiens Primates p53 P53 famplex_relations TP63 8626
Homo sapiens Primates p53 P53 famplex_relations TP73 7161
Homo sapiens Primates NFKB NFKB ncbigene_synonym NFKB1 4790
Homo sapiens Primates NFKB NFKB famplex_relations RELA 5970
Homo sapiens Primates NFKB NFKB famplex_relations RELB 5971
Homo sapiens Primates NFKB NFKB famplex_relations REL 5966
Homo sapiens Primates NFKB NFKB famplex_relations NFKB2 4791
Homo sapiens Primates HLF HLF ncbigene_symbol HLF 3131
Homo sapiens Primates HLF HLF ncbigene_synonym EPAS1 2034
Homo sapiens Primates Nth1, NTH1 ncbigene_synonym NTHL1 4913
Homo sapiens Primates Ogg1, OGG1 ncbigene_symbol OGG1 4968
Homo sapiens Primates NEIL1) NEIL1 ncbigene_symbol NEIL1 79661
Homo sapiens Primates (MPG, MPG ncbigene_symbol MPG 4350
Homo sapiens Primates HIF-1a. HIF1A ncbigene_symbol HIF1A 3091
Homo sapiens Primates CREB CREB ncbigene_synonym CREB1 1385
Homo sapiens Primates CREB CREB famplex_relations CREB3 10488
Homo sapiens Primates CREB CREB famplex_relations CREB5 9586
Homo sapiens Primates CREB CREB famplex_relations CREB3L1 90993
Homo sapiens Primates CREB CREB famplex_relations CREB3L2 64764
Homo sapiens Primates CREB CREB famplex_relations CREB3L3 84699
Homo sapiens Primates CREB CREB famplex_relations CREB3L4 148327
Homo sapiens Primates CREB CREB famplex_relations CREM 1390
Homo sapiens Primates CREB CREB famplex_relations ATF1 466
Homo sapiens Primates CREB CREB famplex_relations ATF2 1386
Homo sapiens Primates Ape1/Ref-1 APE1 ncbigene_synonym APEX1 328
Homo sapiens Primates Ref-1 REF1 ncbigene_synonym TEAD1 7003
Homo sapiens Primates Ref-1 REF1 ncbigene_synonym TFPI2 7980
Homo sapiens Primates ATF ATF ncbigene_synonym GDNF 2668
Homo sapiens Primates ATF ATF ncbigene_synonym PLAU 5328
Homo sapiens Primates Egr-1 EGR1 ncbigene_symbol EGR1 1958
Homo sapiens Primates NF-Y NFY famplex_relations NFYA 4800
Homo sapiens Primates NF-Y NFY famplex_relations NFYB 4801
Homo sapiens Primates NF-Y NFY famplex_relations NFYC 4802
Homo sapiens Primates T-G TG ncbigene_symbol TG 7038
Homo sapiens Primates A-T-C ATC ncbigene_synonym ATM 472
Rattus norvegicus Rodents p53 P53 ncbigene_synonym Tp53 24842
Rattus norvegicus Rodents NFKB NFKB ncbigene_synonym Nfkb1 81736
Rattus norvegicus Rodents NFKB NFKB ncbigene_synonym Rela 309165
Rattus norvegicus Rodents HLF HLF ncbigene_symbol Hlf 690286
Rattus norvegicus Rodents HLF HLF ncbigene_synonym Epas1 29452
Rattus norvegicus Rodents Nth1, NTH1 ncbigene_synonym Nthl1 29541
Rattus norvegicus Rodents Ogg1, OGG1 ncbigene_symbol Ogg1 81528
Rattus norvegicus Rodents NEIL1) NEIL1 ncbigene_symbol Neil1 367090
Rattus norvegicus Rodents (MPG, MPG ncbigene_symbol Mpg 24561
Rattus norvegicus Rodents HIF-1a. HIF1A ncbigene_symbol Hif1a 29560
Rattus norvegicus Rodents CREB CREB ncbigene_synonym Creb1 81646
Rattus norvegicus Rodents Ape1/Ref-1 REF-1 ncbigene_synonym Apex1 79116
Rattus norvegicus Rodents Egr-1 EGR1 ncbigene_symbol Egr1 24330
Rattus norvegicus Rodents T-G TG ncbigene_symbol Tg 24826
Ovis aries Mammals p53 P53 ncbigene_synonym TP53 443421
Ovis aries Mammals NFKB NFKB ncbigene_synonym NFKB2 443119
Ovis aries Mammals HLF HLF ncbigene_symbol HLF 100192429
Ovis aries Mammals Ogg1, OGG1 ncbigene_symbol OGG1 101104015
Ovis aries Mammals NEIL1) NEIL1 ncbigene_symbol NEIL1 101106367
Ovis aries Mammals (MPG, MPG ncbigene_symbol MPG 101120377
Ovis aries Mammals HIF-1a. HIF1A ncbigene_symbol HIF1A 443519
Ovis aries Mammals CREB CREB ncbigene_synonym CREB1 443118
Ovis aries Mammals Egr-1 EGR1 ncbigene_symbol EGR1 443547
Ovis aries Mammals T-G TG ncbigene_symbol TG 101122868
Bos taurus Mammals HLF HLF ncbigene_symbol HLF 516069
Bos taurus Mammals Ogg1, OGG1 ncbigene_symbol OGG1 520497
Bos taurus Mammals NEIL1) NEIL1 ncbigene_symbol NEIL1 513458
Bos taurus Mammals (MPG, MPG ncbigene_symbol MPG 618306
Bos taurus Mammals HIF-1a. HIF1A ncbigene_symbol HIF1A 281814
Bos taurus Mammals CREB CREB ncbigene_synonym CREB1 281713
Bos taurus Mammals Ape1/Ref-1 REF-1 ncbigene_synonym APEX1 281630
Bos taurus Mammals Egr-1 EGR1 ncbigene_symbol EGR1 407125
Bos taurus Mammals T-G TG ncbigene_symbol TG 280706
Danio rerio Vertebrates p53 P53 ncbigene_synonym tp53 30590
Danio rerio Vertebrates Ogg1, OGG1 ncbigene_symbol ogg1 791194
Danio rerio Vertebrates NEIL1) NEIL1 ncbigene_symbol neil1 393253
Danio rerio Vertebrates (MPG, MPG ncbigene_symbol mpg 566516
Danio rerio Vertebrates HIF-1a. HIF1A ncbigene_synonym hif1ab 393202
Danio rerio Vertebrates Egr-1 EGR1 ncbigene_symbol egr1 30498
Danio rerio Vertebrates T-G TG ncbigene_symbol tg 567631
Drosophila melanogaster Invertebrates AP-1 AP-1 ncbigene_synonym AP-1gamma 31842
Drosophila melanogaster Invertebrates AP-1 AP-1 ncbigene_synonym Jra 36057
Drosophila melanogaster Invertebrates AP-1 AP-1 ncbigene_synonym kay 3772082
Drosophila melanogaster Invertebrates p53 P53 ncbigene_symbol p53 2768677
Drosophila melanogaster Invertebrates p53 P53 ncbigene_synonym betaTub60D 37888
Drosophila melanogaster Invertebrates p53 P53 ncbigene_synonym hth 41273
Drosophila melanogaster Invertebrates NFKB NFKB ncbigene_synonym Dif 35045
Drosophila melanogaster Invertebrates NFKB NFKB ncbigene_synonym dl 35047
Drosophila melanogaster Invertebrates NFKB NFKB ncbigene_synonym Rel 41087
Drosophila melanogaster Invertebrates -E-A-AT- EAAT ncbigene_synonym Eaat2 33247
Drosophila melanogaster Invertebrates -E-A-AT- EAAT ncbigene_synonym Eaat1 34251
Drosophila melanogaster Invertebrates Nth1, NTH1 ncbigene_synonym CG9272 35365
Drosophila melanogaster Invertebrates Ogg1, OGG1 ncbigene_symbol Ogg1 31806
Drosophila melanogaster Invertebrates HIF-1a. HIF1A ncbigene_synonym sima 43580
Drosophila melanogaster Invertebrates CREB CREB ncbigene_synonym CrebB 32817
Drosophila melanogaster Invertebrates CREB CREB ncbigene_synonym CrebA 39682
Drosophila melanogaster Invertebrates Ape1/Ref-1 REF1 ncbigene_symbol Ref1 44029
Drosophila melanogaster Invertebrates PAX PAX ncbigene_symbol Pax 35215
Drosophila melanogaster Invertebrates AP AP ncbigene_symbol ap 35509
Drosophila melanogaster Invertebrates T-G TG ncbigene_symbol Tg 34093
Drosophila melanogaster Invertebrates A-T-C ATC ncbigene_synonym Srpk79D 40461
Drosophila melanogaster Invertebrates and AND ncbigene_synonym CkIIbeta 32132
Drosophila melanogaster Invertebrates and AND ncbigene_synonym Andorra 32798
Drosophila melanogaster Invertebrates and AND ncbigene_synonym Anp 43595
Drosophila melanogaster Invertebrates and AND ncbigene_synonym Acam 44913
Drosophila melanogaster Invertebrates A--C AC ncbigene_symbol ac 30981

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID
Cancer NA