Current model of the Fanconi anemia pathway

Current model of the Fanconi anemia pathway. (Adapted with modifications from “The molecular pathogenesis of Fanconi anemia: recent progress” Taniguchi T and D'Andrea AD. Blood, Jun 2006; 107: 4223 – 4233. []) Eight FA proteins (FANC-A, -B, -C, -E, -F, -G, -L and -M), a FANCM-interacting protein called FAAP24 and an unidentified factor (FAAP100) form a nuclear complex (the FA core complex) with E3 ubiquitin ligase activity. FANCL is the catalytic subunit of the complex and directly interacts with the E2 ubiquitin conjugating enzyme UBE2T through its PHD/RING domain. UBE2T can be inactivated by auto-monoubiquitylation on lysine 91 (K91), but is suggested to form a thioester intermediate with ubiquitin through it's catalytic cysteine 86 (C86) when taking part in the ubiquitylation of FANCD2 (see below). The FA core complex, BLM, RPA and topoisomerase IIIα form a larger super-complex called BRAFT. Note that for diagrammatic purposes the FA core complex is shown here interacting with the FAAP100 subunit, but in reality the quaternary structure of the BRAFT complex is unknown. In response to exogenous DNA damage, or during normal S phase progression, the FANCD2 protein is monoubiquitylated on lysine 561 (K561) in an FA core complex- and UBE2T-dependent manner. DNA damage-induced monoubiquitylation of FANCD2 also requires ATR and RPA. Monoubiquitylation of FANCD2 targets the protein into nuclear foci where it co-localizes with BRCA1, FANCD1/BRCA2, FANCN/PALB2, RAD51, FANCJ/BRIP1 and other proteins. At least some components of the FA core complex (FANCC, FANCE and FANCG) also form nuclear foci. All of these factors are required for cellular resistance to DNA crosslinking agents. Monoubiquitylation of PCNA on lysine 164 (K164) requires RAD6 as an E2 and RAD18 as an E3, but not the FA core complex. In turn, modification of PCNA causes recruitment of translesion synthesis (TLS) DNA polymerases at the site of stalled replication forks. USP1 deubiquitylates both PCNA and FANCD2, negatively regulating both the Fanconi anemia pathway and monoubiquitylation of PCNA.
Current model of the Fanconi anemia pathway

Publication

The Fanconi anemia pathway and ubiquitin. (2007) Céline Jacquemont, et al. BMC Biochem. 2007;8(Suppl 1):S10-S10. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Mus musculus Rodents FANCL FANCL ncbigene_symbol Fancl 67030
Mus musculus Rodents FANCE FANCE ncbigene_symbol Fance 72775
Mus musculus Rodents FAAP24 FAAP24 ncbigene_symbol Faap24 101831
Mus musculus Rodents FANCM FANCM ncbigene_symbol Fancm 104806
Mus musculus Rodents BLM BLM ncbigene_symbol Blm 12144
Mus musculus Rodents BLM BLM ncbigene_synonym Vps50 73288
Mus musculus Rodents FANCA FANCA ncbigene_symbol Fanca 14087
Mus musculus Rodents FAAP100 FAAP100 ncbigene_symbol Faap100 71885
Mus musculus Rodents FANCB FANCB ncbigene_symbol Fancb 237211
Mus musculus Rodents FANCF FANCF ncbigene_symbol Fancf 100040608
Mus musculus Rodents FANCG FANCG ncbigene_symbol Fancg 60534
Mus musculus Rodents FANCC FANCC ncbigene_symbol Fancc 14088
Mus musculus Rodents FA FA ncbigene_symbol fa 14072
Mus musculus Rodents RPA RPA ncbigene_synonym Rpa1 68275
Mus musculus Rodents ATR ATR ncbigene_symbol Atr 245000
Mus musculus Rodents ATR ATR ncbigene_synonym Mmab 77697
Mus musculus Rodents FANCD2 FANCD2 ncbigene_symbol Fancd2 211651
Mus musculus Rodents BRCA1 BRCA1 ncbigene_symbol Brca1 12189
Mus musculus Rodents TLS TLS ncbigene_synonym Fus 233908
Mus musculus Rodents PCNA PCNA ncbigene_symbol Pcna 18538
Mus musculus Rodents RAD18 RAD18 ncbigene_symbol Rad18 58186
Homo sapiens Primates FANCL FANCL ncbigene_symbol FANCL 55120
Homo sapiens Primates FANCE FANCE ncbigene_symbol FANCE 2178
Homo sapiens Primates FAAP24 FAAP24 ncbigene_symbol FAAP24 91442
Homo sapiens Primates FANCM FANCM ncbigene_symbol FANCM 57697
Homo sapiens Primates BLM BLM ncbigene_symbol BLM 641
Homo sapiens Primates FANCA FANCA ncbigene_symbol FANCA 2175
Homo sapiens Primates FAAP100 FAAP100 ncbigene_symbol FAAP100 80233
Homo sapiens Primates FANCB FANCB ncbigene_symbol FANCB 2187
Homo sapiens Primates FANCO FANCO ncbigene_synonym RAD51C 5889
Homo sapiens Primates FANCF FANCF ncbigene_symbol FANCF 2188
Homo sapiens Primates FANCG FANCG ncbigene_symbol FANCG 2189
Homo sapiens Primates FANCC FANCC ncbigene_symbol FANCC 2176
Homo sapiens Primates RPA RPA ncbigene_synonym RPA1 6117
Homo sapiens Primates RPA RPA famplex_relations RPA2 6118
Homo sapiens Primates RPA RPA famplex_relations RPA3 6119
Homo sapiens Primates Toplia TOPIIA ncbigene_synonym TOP2A 7153
Homo sapiens Primates ATR ATR ncbigene_symbol ATR 545
Homo sapiens Primates ATR ATR ncbigene_synonym ANTXR1 84168
Homo sapiens Primates ATR ATR ncbigene_synonym MMAB 326625
Homo sapiens Primates ATR ATR ncbigene_synonym SERPINA2 390502
Homo sapiens Primates FANCD2 FANCD2 ncbigene_symbol FANCD2 2177
Homo sapiens Primates BRCA1 BRCA1 ncbigene_symbol BRCA1 672
Homo sapiens Primates polymerases POLYMERASE ncbigene_synonym ERVK-9 100616102
Homo sapiens Primates polymerases POLYMERASE ncbigene_synonym ERVK-11 100862688
Homo sapiens Primates polymerases POLYMERASE ncbigene_synonym ERVK-19 105376906
Homo sapiens Primates TLS TLS ncbigene_synonym FUS 2521
Homo sapiens Primates PCNA PCNA ncbigene_symbol PCNA 5111
Homo sapiens Primates RAD18 RAD18 ncbigene_symbol RAD18 56852
Homo sapiens Primates BRCA BRCA famplex_relations BRCA2 675
Gallus gallus Vertebrates FANCL FANCL ncbigene_symbol FANCL 421202
Gallus gallus Vertebrates FANCE FANCE ncbigene_symbol FANCE 419891
Gallus gallus Vertebrates FAAP24 FAAP24 ncbigene_symbol FAAP24 415770
Gallus gallus Vertebrates FANCM FANCM ncbigene_symbol FANCM 100857997
Gallus gallus Vertebrates BLM BLM ncbigene_symbol BLM 415577
Gallus gallus Vertebrates FANCA FANCA ncbigene_symbol FANCA 415854
Gallus gallus Vertebrates FAAP100 FAAP100 ncbigene_symbol FAAP100 100049617
Gallus gallus Vertebrates FANCB FANCB ncbigene_symbol FANCB 418628
Gallus gallus Vertebrates FANCF FANCF ncbigene_symbol FANCF 101750641
Gallus gallus Vertebrates FANCG FANCG ncbigene_symbol FANCG 378893
Gallus gallus Vertebrates FANCC FANCC ncbigene_symbol FANCC 427468
Gallus gallus Vertebrates ATR ATR ncbigene_symbol ATR 424777
Gallus gallus Vertebrates FANCD2 FANCD2 ncbigene_symbol FANCD2 415935
Gallus gallus Vertebrates BRCA1 BRCA1 ncbigene_symbol BRCA1 373983
Gallus gallus Vertebrates PCNA PCNA ncbigene_symbol PCNA 373984
Gallus gallus Vertebrates RAD18 RAD18 ncbigene_symbol RAD18 416114
Danio rerio Vertebrates FANCL FANCL ncbigene_symbol fancl 406255
Danio rerio Vertebrates FANCE FANCE ncbigene_symbol fance 565685
Danio rerio Vertebrates FAAP24 FAAP24 ncbigene_symbol faap24 559470
Danio rerio Vertebrates FANCM FANCM ncbigene_symbol fancm 100006685
Danio rerio Vertebrates BLM BLM ncbigene_symbol blm 572540
Danio rerio Vertebrates FANCA FANCA ncbigene_symbol fanca 692125
Danio rerio Vertebrates FAAP100 FAAP100 ncbigene_symbol faap100 100001169
Danio rerio Vertebrates FANCB FANCB ncbigene_symbol fancb 108179053
Danio rerio Vertebrates FANCO FANCO ncbigene_synonym rad51c 450081
Danio rerio Vertebrates FANCF FANCF ncbigene_symbol fancf 692250
Danio rerio Vertebrates FANCG FANCG ncbigene_symbol fancg 402936
Danio rerio Vertebrates FANCC FANCC ncbigene_symbol fancc 692127
Danio rerio Vertebrates RPA RPA ncbigene_synonym rpa2 65226
Danio rerio Vertebrates ATR ATR ncbigene_symbol atr 567770
Danio rerio Vertebrates FANCD2 FANCD2 ncbigene_symbol fancd2 394241
Danio rerio Vertebrates PCNA PCNA ncbigene_symbol pcna 30678
Danio rerio Vertebrates RAD18 RAD18 ncbigene_symbol rad18 393106
Drosophila melanogaster Invertebrates FANCL FANCL ncbigene_symbol Fancl 41231
Drosophila melanogaster Invertebrates FANCM FANCM ncbigene_symbol Fancm 42543
Drosophila melanogaster Invertebrates BLM BLM ncbigene_symbol Blm 41366
Drosophila melanogaster Invertebrates RPA RPA ncbigene_synonym RPA3 32113
Drosophila melanogaster Invertebrates RPA RPA ncbigene_synonym RPA2 35364
Drosophila melanogaster Invertebrates RPA RPA ncbigene_synonym RPA1 40972
Drosophila melanogaster Invertebrates ATR ATR ncbigene_synonym mei-41 32608
Drosophila melanogaster Invertebrates ATR ATR ncbigene_synonym put 41772
Drosophila melanogaster Invertebrates ATR ATR ncbigene_synonym RYa-R 43253
Drosophila melanogaster Invertebrates FANCD2 FANCD2 ncbigene_symbol Fancd2 2768674
Drosophila melanogaster Invertebrates PCNA PCNA ncbigene_symbol PCNA 37290
Drosophila melanogaster Invertebrates E3 E3 ncbigene_symbol E3 5658048
Drosophila melanogaster Invertebrates BRCA BRCA ncbigene_synonym Brca2 37916
Arabidopsis thaliana Plants and Fungi FANCM FANCM ncbigene_symbol FANCM 840448
Arabidopsis thaliana Plants and Fungi RPA RPA ncbigene_symbol RPA 818088
Arabidopsis thaliana Plants and Fungi ATR ATR ncbigene_symbol ATR 834082
Arabidopsis thaliana Plants and Fungi BRCA1 BRCA1 ncbigene_symbol BRCA1 827854
Xenopus laevis Vertebrates FANCL FANCL ncbigene_synonym fancl.L 734197
Xenopus laevis Vertebrates FAAP24 FAAP24 ncbigene_synonym faap24.L 496036
Xenopus laevis Vertebrates FANCM FANCM ncbigene_synonym fancm.L 100286772
Xenopus laevis Vertebrates BLM BLM ncbigene_synonym blm.S 373628
Xenopus laevis Vertebrates FANCA FANCA ncbigene_synonym fanca.L 734195
Xenopus laevis Vertebrates FANCB FANCB ncbigene_synonym brca2.L 108708691
Xenopus laevis Vertebrates FANCF FANCF ncbigene_synonym fancf.L 446262
Xenopus laevis Vertebrates FANCG FANCG ncbigene_synonym fancg.S 100125673
Xenopus laevis Vertebrates FANCC FANCC ncbigene_synonym fancc.L 100329211
Xenopus laevis Vertebrates RPA RPA ncbigene_synonym rpa1.L 397937
Xenopus laevis Vertebrates RPA RPA ncbigene_synonym rpa1.S 108708846
Xenopus laevis Vertebrates ATR ATR ncbigene_synonym atr.L 398197
Xenopus laevis Vertebrates ATR ATR ncbigene_synonym antxr1.L 108711547
Xenopus laevis Vertebrates ATR ATR ncbigene_synonym antxr1.S 108712766
Xenopus laevis Vertebrates FANCD2 FANCD2 ncbigene_synonym fancd2.L 734196
Xenopus laevis Vertebrates BRCA1 BRCA1 ncbigene_synonym brca1.L 399391
Xenopus laevis Vertebrates PCNA PCNA ncbigene_synonym pcna.S 394328
Xenopus laevis Vertebrates PCNA PCNA ncbigene_synonym pcna.L 398425
Xenopus laevis Vertebrates RAD18 RAD18 ncbigene_synonym rad18.L 108714633

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID
Fanconi anemia NA