Diagram of folate and one-carbon metabolism in mammalian organisms

Diagram of folate and one-carbon metabolism in mammalian organisms. Intracellular one-carbon transfer reactions are essential for nucleotide (thymidylate and purine) synthesis and methylation of numerous compounds, including DNA, RNA, proteins, and phospholipids. These one-carbon transfer reactions are mainly supported by folate, a B vitamin that serves as a one-carbon carrier/donor. This diagram depicts absorption, transport, and metabolism of folate around the intracellular one-carbon metabolism as well as enzymes/proteins and other nutritional factors involved.– Folates in food, mostly polyglutamates, are hydrolyzed to monoglutamates by GGH in the gut and are absorbed across the intestinal mucosa with folic acid from fortified foods and supplements mostly by a saturable pH-dependent process, via reduced folate carrier (encoded by SLC19A1), and by passive diffusion at high concentrations. Once absorbed into the portal circulation, folates are taken up by the liver, where they are metabolized to polyglutamates by FPGS and retained or released into blood or bile as 5-methylTHF. Folate released in bile is reabsorbed in the small intestine. About two thirds of 5-methylTHF, the predominant form of folate in circulation, is bound to low-affinity proteins, mostly albumin: low levels of high-affinity folate binders are also found in blood. Blood 5-methylTHF is transported into the cell by carrier-mediated or receptor-mediated mechanisms. Reduced folate carrier has a higher affinity for reduced folate than oxidized folic acid and accounts for the transport of most folate and methotrexate. Membrane-bound folate receptors, including folate receptor 1 encoded by FOLR1, with high affinity for folic acid are expressed in epithelial tissues, and its expression is elevated in malignant epithelial tumors. The predominant cytoplasmic folate, 5-methylTHF, donates its one-carbon moiety to methylate homocysteine to methionine, yielding THF. THF is a much preferred substrate to FPGS that lengthens the glutamate chain of the monoglutamate folate so folates can be retained in the cell. This polyglutamylation also enables folates to be used by one-carbon metabolizing enzymes that have much higher affinities for polyglutamates than monoglutamates. In deficiency of vitamin B12, which is a coenzyme for methionine synthase (MTR) that converts 5-methylTHF to THF, or with insufficient transcobalamins (TCN1, TCN2) for vitamin B12 absorption, deficiency of functional folate (THF) occurs despite sufficient folate in circulation (“methyl-trap”). MTR loses its activity when its vitamin B12–derived coenzyme, cobalamin, gets oxidized: MTRR reactivates MTR using the methyl supply from SAM. Homocysteine can be remethylated via an alternative mechanism of BHMT using betaine, supplied from dietary choline, in kidney and liver. Methionine, from homocysteine and also supplied from diet, is converted to SAM, a universal donor of one-carbon unit to numerous methylation reactions via MTs in part for DNA methylation. Resulting SAH is hydrolyzed to homocysteine, which then gets remethylated or catabolyzed via the transsulfuration pathway initiated by CBS. The active coenzyme THF obtains one-carbon moiety from amino acid serine via SHMT1 catalysis, yielding 5,10-methyleneTHF, which is an important common substrate to methylation pathway described (remethylation of homocysteine to methionine) via MTHFR or to nucleic acid synthesis pathways via TYMS (uridylate to thymidylate conversion; pyrimidine synthesis) or MTHFD1/FTHFD (purine synthesis). DHF, the remnant of TYMS reaction on THF, is also supplied from folic acid that is reported to be found in blood in higher proportion than usual when a large dose is consumed from fortified foods or supplements. 5,10-MethenylTHF can be interconverted with 5-formylTHF (also known as folinic acid or leucovorin; thought to be the storage form of folate) via SHMT1/MTHFS. Although less understood, mitochondrial one-carbon metabolism is proposed to be in equilibrium with cytoplasmic metabolism and contains glycine cleavage system. AHCY indicates S-adenosylhomocysteine hydrolase; AICART, phosphoribosylaminoimidazolecarboxamide formyltransferase; AMT, aminomethyltransferase; B2, vitamin B2; B6, vitamin B6; B12, vitamin B12; BHMT, betaine-homocysteine methyltransferase; CBS, cystathionine-beta-synthase; CTH, cystathionase; DHF, dihydrofolate; DHFR, dihydrofolate reductase; FPGS, folylpolyglutamate synthase; dTMP, deoxythymidine monophosphate; dUMP, deoxyuridine monophosphate; FOLR, folate receptor; FTHFD, 10-formyltetrahydrofolate dehydrogenase; FTHFS, 10-formyltetrahydrofolate synthase; FTHFSDC1, 10-formyltetrahydrofolate synthetase domain containing 1; GART, glycinamide ribonucleotide formyltransferase; GCPII, glutamate carboxypeptidase II; GCSH, glycine cleavage system protein H; GGH, gamma-glutamylhydrolase; MAT, methionine S-adenosyltransferase; MTs, a group of methyltransferases; MTHFD1, cytoplasmic 5,10-methylenetetrahydrofolate dehydrogenase; MTHFD2, mitochondrial 5,10-methylenetetrahydrofolate dehydrogenase; MTHFR, 5,10-methylenetetrahydrofolate reductase; MTHFS, 5,10-methenyltetrahydrofolate synthetase; MTR, methionine synthase; MTRR, methionine synthase reductase; PLP, pyridoxal 5′-phosphate; SAH, S-adenosylhomocysteine; SAM, S-adenosylmethionine; SHMT1, cytoplasmic serine hydroxymethyltransferase; SHMT2, mitochondrial serine hydroxymethyltransferase; SLC19A1, reduced folate carrier; TCN1, transcobalamin 1; TCN2, transcobalamin 2; THF, tetrahydrofolate; and TYMS, thymidylate synthetase.
Diagram of folate and one-carbon metabolism in mammalian organisms

Publication

Gene-nutrient interactions among determinants of folate and one-carbon metabolism on the risk of non-Hodgkin lymphoma: NCI-SEER Case-Control Study. (2007) Unhee Lim, et al. Blood. 2007 Apr 1;109(7):3050-3059. Figure: F1.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates GGH GGH ncbigene_symbol GGH 8836
Homo sapiens Primates FPGS FPGS ncbigene_symbol FPGS 2356
Homo sapiens Primates FOLR FOLR ncbigene_synonym FOLR1 2348
Homo sapiens Primates SLC19A1 SLC19A1 ncbigene_symbol SLC19A1 6573
Homo sapiens Primates B12 B12 ncbigene_synonym NDUFB3 4709
Homo sapiens Primates B12 B12 ncbigene_synonym TNFAIP1 7126
Homo sapiens Primates TCN1 TCN1 ncbigene_symbol TCN1 6947
Homo sapiens Primates TCN2 TCN2 ncbigene_symbol TCN2 6948
Homo sapiens Primates FTHFD FTHFD ncbigene_synonym ALDH1L1 10840
Homo sapiens Primates [MTHFD1 MTHFD1 ncbigene_symbol MTHFD1 4522
Homo sapiens Primates GART GART ncbigene_symbol GART 2618
Homo sapiens Primates SHMT1 SHMT1 ncbigene_symbol SHMT1 6470
Homo sapiens Primates MTHFS MTHFS ncbigene_symbol MTHFS 10588
Homo sapiens Primates MTHFS MTHFS ncbigene_synonym ST20-MTHFS 100528021
Homo sapiens Primates MAT MAT ncbigene_synonym ACAT1 38
Homo sapiens Primates MAT MAT ncbigene_synonym MAT1A 4143
Homo sapiens Primates DHFR DHFR ncbigene_symbol DHFR 1719
Homo sapiens Primates MTHFD2 MTHFD2 ncbigene_symbol MTHFD2 10797
Homo sapiens Primates TYMS TYMS ncbigene_symbol TYMS 7298
Homo sapiens Primates MTs MTS ncbigene_synonym TIMM8A 1678
Homo sapiens Primates MTs MTS ncbigene_synonym MLRL 8201
Homo sapiens Primates MTR MTR ncbigene_symbol MTR 4548
Homo sapiens Primates (MTRR) MTRR ncbigene_symbol MTRR 4552
Homo sapiens Primates AMT AMT ncbigene_symbol AMT 275
Homo sapiens Primates SAH SAH ncbigene_synonym ACSM3 6296
Homo sapiens Primates SHMT2 SHMT2 ncbigene_symbol SHMT2 6472
Homo sapiens Primates АНСY AHCY ncbigene_symbol AHCY 191
Homo sapiens Primates MTHFR MTHFR ncbigene_symbol MTHFR 4524
Homo sapiens Primates B2 B2 ncbigene_synonym NEUROD1 4760
Homo sapiens Primates B2 B2 ncbigene_synonym TUBB4B 10383
Homo sapiens Primates CBS CBS ncbigene_symbol CBS 875
Homo sapiens Primates (PLP) PLP ncbigene_synonym PLP1 5354
Homo sapiens Primates (PLP) PLP ncbigene_synonym PTHLH 5744
Homo sapiens Primates (PLP) PLP ncbigene_synonym PRDX5 25824
Homo sapiens Primates (PLP) PLP ncbigene_synonym PDXP 57026
Homo sapiens Primates CTH CTH ncbigene_symbol CTH 1491
Homo sapiens Primates CTH CTH ncbigene_synonym VSIG2 23584

Chemical mentions

Word Match MeSH Name ChEBI
7,8-dihydrofolate NA mesh:C010920
pyrimidine NA mesh:C030986
choline Choline mesh:D002794 choline chebi:15354
cystathionine Cystathionine mesh:D003540 cystathionine chebi:17755
cysteine Cysteine mesh:D003545 cysteine chebi:15356
folate Folic Acid mesh:D005492 folic acid chebi:27470
folic acid Folic Acid mesh:D005492 folic acid chebi:27470
glutathione Glutathione mesh:D005978 glutathione chebi:16856
Glycine Glycine mesh:D005998 glycine chebi:15428
glycine Glycine mesh:D005998 glycine chebi:15428
homocysteine Homocysteine mesh:D006710 homocysteine chebi:17230
methionine NA mesh:D008715
purine Purines mesh:D011687 purines chebi:26401
serine Serine mesh:D012694 L-serine chebi:17115
Vitamin B12 Vitamin B 12 mesh:D014805 cyanocob(III)alamin chebi:17439

Disease mentions

Word Match MeSH Name DOID