Sequence logo [41] of putative regulatory motif
(a) Sequence logo [41] of putative regulatory motif. (b) Subsection of the glucose fermentation pathway. Numbers represent the occurrences of the putative motif in the gene's promoter.
![Sequence logo [41] of putative regulatory motif](https://europepmc.org/articles/PMC1525002/bin/1471-2105-7-266-4.jpg)
Publication
Phylogeny based discovery of regulatory elements. (2006) Jason Gertz, et al. BMC Bioinformatics. 2006;7:266-266. Figure: F4.| Organism | Group | Word | Match | Source | NCBI Symbol | NCBI ID |
|---|---|---|---|---|---|---|
| Saccharomyces cerevisiae S288C | Plants and Fungi | TDH1: | TDH1 | ncbigene_symbol | TDH1 | 853395 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | PGK1: | PGK1 | ncbigene_symbol | PGK1 | 850370 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | GPM1: | GPM1 | ncbigene_symbol | GPM1 | 853705 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ENO1: | ENO1 | ncbigene_symbol | ENO1 | 853169 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ENO2: | ENO2 | ncbigene_symbol | ENO2 | 856579 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | CDC19: | CDC19 | ncbigene_symbol | CDC19 | 851193 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | PDC1: | PDC1 | ncbigene_symbol | PDC1 | 850733 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | PDC5: | PDC5 | ncbigene_symbol | PDC5 | 850825 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | PDC6: | PDC6 | ncbigene_symbol | PDC6 | 852978 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ALD4: | ALD4 | ncbigene_symbol | ALD4 | 854556 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ADH4: | ADH4 | ncbigene_symbol | ADH4 | 852636 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ADH1: | ADH1 | ncbigene_symbol | ADH1 | 854068 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ALD5: | ALD5 | ncbigene_symbol | ALD5 | 856804 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ADH2: | ADH2 | ncbigene_symbol | ADH2 | 855349 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ADH5: | ADH5 | ncbigene_symbol | ADH5 | 852442 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ADH5: | ADH5 | ncbigene_synonym | SFA1 | 851386 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ALD6: | ALD6 | ncbigene_symbol | ALD6 | 856044 |
| Saccharomyces cerevisiae S288C | Plants and Fungi | ADH3: | ADH3 | ncbigene_symbol | ADH3 | 855107 |
| Homo sapiens | Primates | TDH1: | TDH1 | ncbigene_synonym | SLC5A5 | 6528 |
| Homo sapiens | Primates | PGK1: | PGK1 | ncbigene_symbol | PGK1 | 5230 |
| Homo sapiens | Primates | ENO1: | ENO1 | ncbigene_symbol | ENO1 | 2023 |
| Homo sapiens | Primates | ENO2: | ENO2 | ncbigene_symbol | ENO2 | 2026 |
| Homo sapiens | Primates | CDC19: | CDC19 | ncbigene_synonym | MCM2 | 4171 |
| Homo sapiens | Primates | ADH4: | ADH4 | ncbigene_symbol | ADH4 | 127 |
| Homo sapiens | Primates | ADH4: | ADH4 | ncbigene_synonym | ADH7 | 131 |
| Homo sapiens | Primates | ADH1: | ADH1 | ncbigene_synonym | ADH1A | 124 |
| Homo sapiens | Primates | ADH2: | ADH2 | ncbigene_synonym | ADH1B | 125 |
| Homo sapiens | Primates | ADH5: | ADH5 | ncbigene_symbol | ADH5 | 128 |
| Homo sapiens | Primates | ADH5: | ADH5 | ncbigene_synonym | ADH6 | 130 |
| Homo sapiens | Primates | ADH3: | ADH3 | ncbigene_synonym | ADH1C | 126 |
| Word | Match | MeSH | Name | ChEBI |
|---|---|---|---|---|
| 3-phosphoglycerate | NA | mesh:C005156 | ||
| acetaldehyde | Acetaldehyde | mesh:D000079 | acetaldehyde | chebi:15343 |
| acetate | Acetates | mesh:D000085 | acetate ester | chebi:47622 |
| ethanol | Ethanol | mesh:D000431 | ethanol | chebi:16236 |
| Glyceraldehyde-3-phosphate | Glyceraldehyde 3-Phosphate | mesh:D005986 | glyceraldehyde 3-phosphate | chebi:17138 |
| phosphoenolpyruvate | Phosphoenolpyruvate | mesh:D010728 | phosphoenolpyruvate | chebi:18021 |
| pyruvate | NA | mesh:D011773 |
Disease mentions
| Word | Match | MeSH | Name | DOID |
|---|