TNF receptor (TNFR) pathway of signaling
TNF receptor (TNFR) pathway of signaling. Two complex model is shown. Upon ligation with TNF-α (with in 10–20 min), TNFR I undergo trimerization and recruits various adapter molecules resulting in the activation of NF-κB, which induces several anti-apoptotic genes (Complex I formation) and survival signal. This is followed by (more than 2–3 hours) by an endocytosis of receptor complex resulting in the dissociation of certain adapter proteins (TRAF-2, RIP) and recruitment of fas – associated death domain (FADD) and procasepase-8 to form death-inducing signaling complex (DISC). In the DISC, caspase-8 is activated and released into the cytoplasm where it activates effector caspases to induce apoptosis.
Publication
A paradox of immunodeficiency and inflammation in human aging: lessons learned from apoptosis. (2006)
Sudhir Gupta, et al. Immun Ageing. 2006;3:5-5. Figure: F2.
All organisms
Mus musculus
Homo sapiens
Drosophila melanogaster
Danio rerio
Organism
Group
Word
Match
Source
NCBI Symbol
NCBI ID
Mus musculus
Rodents
TNF-a
TNF-A
ncbigene_synonym
Tnf
21926
Mus musculus
Rodents
TNFR
TNFR
ncbigene_synonym
Tnfrsf1a
21937
Mus musculus
Rodents
TRADD
TRADD
ncbigene_symbol
Tradd
71609
Mus musculus
Rodents
TRAF2
TRAF2
ncbigene_symbol
Traf2
22030
Mus musculus
Rodents
RIP
RIP
ncbigene_symbol
Rip
110628
Mus musculus
Rodents
RIP
RIP
ncbigene_synonym
Agfg1
15463
Mus musculus
Rodents
RIP
RIP
ncbigene_synonym
Ptpn13
19249
Mus musculus
Rodents
RIP
RIP
ncbigene_synonym
Ripk1
19766
Mus musculus
Rodents
RIP
RIP
ncbigene_synonym
Rpain
69723
Mus musculus
Rodents
FADD
FADD
ncbigene_symbol
Fadd
14082
Mus musculus
Rodents
(caspase3,6,7)
CASPASE3
ncbigene_synonym
Casp3
12367
Mus musculus
Rodents
FLIP
FLIP
ncbigene_synonym
Cflar
12633
Mus musculus
Rodents
FLIP
FLIP
ncbigene_synonym
Firrm
381306
Mus musculus
Rodents
A20,TRAF-1,2,
A20
ncbigene_synonym
Tnfaip3
21929
Mus musculus
Rodents
TRAF-1,
TRAF1
ncbigene_symbol
Traf1
22029
Mus musculus
Rodents
Bcl-x
BCL-X
ncbigene_synonym
Bcl2l1
12048
Homo sapiens
Primates
TNF-a
TNF-A
ncbigene_synonym
TNF
7124
Homo sapiens
Primates
TNFR
TNFR
ncbigene_synonym
TNFRSF1A
7132
Homo sapiens
Primates
TRADD
TRADD
ncbigene_symbol
TRADD
8717
Homo sapiens
Primates
TRAF2
TRAF2
ncbigene_symbol
TRAF2
7186
Homo sapiens
Primates
TRAF2
TRAF2
ncbigene_synonym
TANK
10010
Homo sapiens
Primates
RIP
RIP
ncbigene_synonym
AGFG1
3267
Homo sapiens
Primates
RIP
RIP
ncbigene_synonym
RIPK1
8737
Homo sapiens
Primates
RIP
RIP
ncbigene_synonym
DCAF1
9730
Homo sapiens
Primates
RIP
RIP
ncbigene_synonym
RPAIN
84268
Homo sapiens
Primates
FADD
FADD
ncbigene_symbol
FADD
8772
Homo sapiens
Primates
IKK
IKK
famplex_relations
CHUK
1147
Homo sapiens
Primates
IKK
IKK
famplex_relations
IKBKB
3551
Homo sapiens
Primates
IKK
IKK
famplex_relations
IKBKG
8517
Homo sapiens
Primates
IKK
IKK
famplex_relations
IKBKE
9641
Homo sapiens
Primates
IKK
IKK
famplex_relations
TBK1
29110
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP1
834
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP2
835
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP4
837
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP5
838
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP6
839
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP8
841
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP9
842
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP10
843
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP12
100506742
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP14
23581
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP3
836
Homo sapiens
Primates
caspases
CASPASE
famplex_relations
CASP7
840
Homo sapiens
Primates
FLIP
FLIP
ncbigene_synonym
CFLAR
8837
Homo sapiens
Primates
FLIP
FLIP
ncbigene_synonym
FIRRM
55732
Homo sapiens
Primates
A20,TRAF-1,2,
A20
ncbigene_synonym
TNFAIP3
7128
Homo sapiens
Primates
A20,TRAF-1,2,
A20
ncbigene_synonym
IGKV1-27
28935
Homo sapiens
Primates
TRAF-1,
TRAF1
ncbigene_symbol
TRAF1
7185
Homo sapiens
Primates
Bcl-x
BCL-X
ncbigene_synonym
BCL2L1
598
Drosophila melanogaster
Invertebrates
TNF-a
TNF-A
ncbigene_synonym
egr
36054
Drosophila melanogaster
Invertebrates
TNFR
TNFR
ncbigene_synonym
wgn
32849
Drosophila melanogaster
Invertebrates
TRAF2
TRAF2
ncbigene_synonym
Traf6
31746
Drosophila melanogaster
Invertebrates
RIP
RIP
ncbigene_symbol
rip
44045
Drosophila melanogaster
Invertebrates
RIP
RIP
ncbigene_synonym
ripp
246815
Drosophila melanogaster
Invertebrates
FADD
FADD
ncbigene_symbol
Fadd
42594
Drosophila melanogaster
Invertebrates
IKK
IKK
ncbigene_synonym
IKKepsilon
35329
Drosophila melanogaster
Invertebrates
IKK
IKK
ncbigene_synonym
key
37967
Drosophila melanogaster
Invertebrates
IKK
IKK
ncbigene_synonym
IKKbeta
44432
Drosophila melanogaster
Invertebrates
(caspase3,6,7)
CASPASE3
ncbigene_synonym
Decay
42008
Drosophila melanogaster
Invertebrates
FLIP
FLIP
ncbigene_symbol
flip
40539
Drosophila melanogaster
Invertebrates
TRAF-1,
TRAF1
ncbigene_synonym
Traf4
33638
Danio rerio
Vertebrates
TNF-a
TNF-A
ncbigene_synonym
tnfb
554167
Danio rerio
Vertebrates
TRADD
TRADD
ncbigene_symbol
tradd
58130
Danio rerio
Vertebrates
FADD
FADD
ncbigene_symbol
fadd
562317
Danio rerio
Vertebrates
FLIP
FLIP
ncbigene_synonym
cflara
373114
Danio rerio
Vertebrates
FLIP
FLIP
ncbigene_synonym
firrm
553598
Danio rerio
Vertebrates
TRAF-1,
TRAF1
ncbigene_symbol
traf1
100148503
Word
Match
MeSH
Name
ChEBI
Disease mentions
Word
Match
MeSH
Name
DOID