Wnt/Beta-catenin pathway and associated ncRNAs

Wnt/β-catenin pathway and associated ncRNAs. When the Wnt signaling pathway is not effectively inhibited by Dickkopf (DKK) or Wnt inhibitory protein (WIF), which interact with lipoprotein receptor-related 5/6 (LRP5/6) to disrupt LRP5/6 and Frizzled (FZD) receptor dimers, Wnt proteins are able to bind to their FZD receptors, leading to dimerization of FZD and LRP5/6 receptors. The formation of FZD/LRP heterodimers induces a conformational change in the receptors, leading to the binding of the cytoplasmic portion of FZD to disheveled (DVL) and phosphorylation of the LRP5/6 tail by GSK3. This phosphorylation event facilitates the recruitment of the scaffold protein Axin. DVL serves as a platform for enhanced interaction between Axin and the LRP5/6 tail. The interaction between Axin, LRP5/6, and DVL disrupts the Destructive Complex (DC), releasing β-catenin. Subsequently, β-catenin translocates into the nucleus, where it displaces corepressor Groucho/transducin with TCF/LEF to form a complex that mediates gene expression. The destruction complex (DC), composed of Axin, adenomatous polyposis (APC), glycogen synthase kinase 3β (GSK3β), and casein kinase 1ɑ (CK1ɑ), functions to maintain β-catenin in an inactive state through phosphorylation by CK1ɑ, facilitating GSK3β-mediated phosphorylation of β-catenin. Subsequent phosphorylation of β-catenin leads to recruitment of β-transducin repeat containing protein (β-Trcp), an E3 ubiquitin ligase that promotes ubiquitination of β-catenin for degradation. The Wnt/β-catenin pathway is also regulated by various ncRNAs
Wnt/Beta-catenin pathway and associated ncRNAs

Publication

Noncoding RNA-Mediated Epigenetic Regulation in Hepatic Stellate Cells of Liver Fibrosis (2024) Ruoyu Gao, et al. Noncoding RNA. 2024 Aug;10(4). Figure: F5.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates Wnt WNT famplex_relations WNT1 7471
Homo sapiens Primates Wnt WNT famplex_relations WNT2 7472
Homo sapiens Primates Wnt WNT famplex_relations WNT2B 7482
Homo sapiens Primates Wnt WNT famplex_relations WNT3 7473
Homo sapiens Primates Wnt WNT famplex_relations WNT3A 89780
Homo sapiens Primates Wnt WNT famplex_relations WNT4 54361
Homo sapiens Primates Wnt WNT famplex_relations WNT6 7475
Homo sapiens Primates Wnt WNT famplex_relations WNT7A 7476
Homo sapiens Primates Wnt WNT famplex_relations WNT7B 7477
Homo sapiens Primates Wnt WNT famplex_relations WNT8A 7478
Homo sapiens Primates Wnt WNT famplex_relations WNT8B 7479
Homo sapiens Primates Wnt WNT famplex_relations WNT9A 7483
Homo sapiens Primates Wnt WNT famplex_relations WNT9B 7484
Homo sapiens Primates Wnt WNT famplex_relations WNT10A 80326
Homo sapiens Primates Wnt WNT famplex_relations WNT10B 7480
Homo sapiens Primates Wnt WNT famplex_relations WNT11 7481
Homo sapiens Primates Wnt WNT famplex_relations WNT16 51384
Homo sapiens Primates Wnt WNT famplex_relations WNT5A 7474
Homo sapiens Primates Wnt WNT famplex_relations WNT5B 81029
Homo sapiens Primates FZD FZD famplex_relations FZD1 8321
Homo sapiens Primates FZD FZD famplex_relations FZD10 11211
Homo sapiens Primates FZD FZD famplex_relations FZD2 2535
Homo sapiens Primates FZD FZD famplex_relations FZD3 7976
Homo sapiens Primates FZD FZD famplex_relations FZD4 8322
Homo sapiens Primates FZD FZD famplex_relations FZD5 7855
Homo sapiens Primates FZD FZD famplex_relations FZD6 8323
Homo sapiens Primates FZD FZD famplex_relations FZD7 8324
Homo sapiens Primates FZD FZD famplex_relations FZD8 8325
Homo sapiens Primates FZD FZD famplex_relations FZD9 8326
Homo sapiens Primates SNHG7 SNHG7 ncbigene_symbol SNHG7 84973
Homo sapiens Primates GSK3 GSK3 famplex_relations GSK3A 2931
Homo sapiens Primates GSK3 GSK3 famplex_relations GSK3B 2932
Homo sapiens Primates LRP5 LRP5 ncbigene_symbol LRP5 4041
Homo sapiens Primates LRP5/6 LRP6 ncbigene_symbol LRP6 4040
Homo sapiens Primates DVL DVL ncbigene_synonym DVL1 1855
Homo sapiens Primates DVL DVL ncbigene_synonym DVL1P1 8215
Homo sapiens Primates DVL DVL famplex_relations DVL2 1856
Homo sapiens Primates DVL DVL famplex_relations DVL3 1857
Homo sapiens Primates Axin AXIN ncbigene_synonym AXIN1 8312
Homo sapiens Primates Axin AXIN famplex_relations AXIN2 8313
Homo sapiens Primates miR-17-5p MIR175P ncbigene_synonym MIR17 406952
Homo sapiens Primates LncRNAATB LNCRNAATB ncbigene_symbol LNCRNA-ATB 114004396
Homo sapiens Primates CK1 CK1 ncbigene_synonym CSNK1A1 1452
Homo sapiens Primates CK1 CK1 ncbigene_synonym KRT1 3848
Homo sapiens Primates CK1 CK1 ncbigene_synonym CSNK1A1L 122011
Homo sapiens Primates miR-200a MIR-200A ncbigene_synonym MIR200A 406983
Homo sapiens Primates APC APC ncbigene_symbol APC 324
Homo sapiens Primates APC APC ncbigene_synonym PROC 5624
Homo sapiens Primates TLE TLE famplex_relations TLE1 7088
Homo sapiens Primates TLE TLE famplex_relations TLE2 7089
Homo sapiens Primates TLE TLE famplex_relations TLE3 7090
Homo sapiens Primates TLE TLE famplex_relations TLE4 7091
Homo sapiens Primates TLE TLE famplex_relations TLE5 166
Homo sapiens Primates TLE TLE famplex_relations TLE6 79816
Homo sapiens Primates TLE TLE famplex_relations TLE7 102723796
Homo sapiens Primates TCF/LEF TCF ncbigene_synonym HNF4A 3172
Homo sapiens Primates NEAT1 NEAT1 ncbigene_symbol NEAT1 283131
Homo sapiens Primates Krm1/2 KRM1 ncbigene_synonym KREMEN1 83999
Homo sapiens Primates Krm1/2 KRM2 ncbigene_synonym KREMEN2 79412
Homo sapiens Primates HDAC HDAC ncbigene_synonym HDAC9 9734
Homo sapiens Primates HDAC HDAC famplex_relations HDAC1 3065
Homo sapiens Primates HDAC HDAC famplex_relations HDAC2 3066
Homo sapiens Primates HDAC HDAC famplex_relations HDAC3 8841
Homo sapiens Primates HDAC HDAC famplex_relations HDAC8 55869
Homo sapiens Primates HDAC HDAC famplex_relations HDAC4 9759
Homo sapiens Primates HDAC HDAC famplex_relations HDAC5 10014
Homo sapiens Primates HDAC HDAC famplex_relations HDAC7 51564
Homo sapiens Primates HDAC HDAC famplex_relations HDAC6 10013
Homo sapiens Primates HDAC HDAC famplex_relations HDAC10 83933
Homo sapiens Primates HDAC HDAC famplex_relations SIRT1 23411
Homo sapiens Primates HDAC HDAC famplex_relations SIRT2 22933
Homo sapiens Primates HDAC HDAC famplex_relations SIRT3 23410
Homo sapiens Primates HDAC HDAC famplex_relations SIRT4 23409
Homo sapiens Primates HDAC HDAC famplex_relations SIRT5 23408
Homo sapiens Primates HDAC HDAC famplex_relations SIRT6 51548
Homo sapiens Primates HDAC HDAC famplex_relations SIRT7 51547
Homo sapiens Primates HDAC HDAC famplex_relations HDAC11 79885

Chemical mentions

Word Match MeSH Name ChEBI

Disease mentions

Word Match MeSH Name DOID