MAPK signaling pathway containing T

(A) MAPK signaling pathway containing T. forsythia upregulated miRNAs in mandibles compared with sham-infected controls at p ≤ 0.05, adapted from the pathway express and using KEGG. Red boxes indicate 45 upregulated miRNA profiles from the NanoString analysis. Green boxes indicate no change in gene expression. An arrow indicates a molecular interaction resulting in classical MAP kinase pathway, phosphatidylinositol signaling system, JNK and p 38 MAP kinase pathway, p53 signaling pathway, ERK5 pathway, Wnt signaling pathway. A line without an arrowhead indicates a molecular interaction resulting in inhibition. Solid and dash-dotted lines denote direct and indirect relationships, respectively. +P indicates phosphorylation, and −P indicates dephosphorylation. The MAPK cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. (B) T cell receptor signaling pathway containing T. forsythia downregulated miRNAs in mandibles compared with sham-infected controls at p ≤ 0.05, adapted from the pathway express and using KEGG. Red boxes indicate 31 significantly downregulated miRNA profiles from the NanoString analysis. Green boxes indicate no change in gene expression. An arrow indicates a molecular interaction resulting in MAPK signaling pathway, calcium signaling pathway, PI3K-Akt signaling pathway, NF-κB signaling pathway, and ubiquitin-mediated proteolysis. A line without an arrowhead indicates a molecular interaction resulting in inhibition
 MAPK signaling pathway containing T

Publication

Unique miRomics Expression Profiles in Tannerella forsythia-Infected Mandibles during Periodontitis Using Machine Learning (2023) Chairmandurai Aravindraja, et al. Int J Mol Sci. 2023 Nov;24(22). Figure: F3.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates MAPK MAPK famplex_relations MAPK1 5594
Homo sapiens Primates MAPK MAPK famplex_relations MAPK3 5595
Homo sapiens Primates MAPK MAPK famplex_relations MAPK11 5600
Homo sapiens Primates MAPK MAPK famplex_relations MAPK12 6300
Homo sapiens Primates MAPK MAPK famplex_relations MAPK13 5603
Homo sapiens Primates MAPK MAPK famplex_relations MAPK14 1432
Homo sapiens Primates MAPK MAPK famplex_relations MAPK8 5599
Homo sapiens Primates MAPK MAPK famplex_relations MAPK9 5601
Homo sapiens Primates MAPK MAPK famplex_relations MAPK10 5602
Homo sapiens Primates PKA PKA famplex_relations PRKAR1A 5573
Homo sapiens Primates PKA PKA famplex_relations PRKAR1B 5575
Homo sapiens Primates PKA PKA famplex_relations PRKAR2A 5576
Homo sapiens Primates PKA PKA famplex_relations PRKAR2B 5577
Homo sapiens Primates PKA PKA famplex_relations PRKACA 5566
Homo sapiens Primates PKA PKA famplex_relations PRKACB 5567
Homo sapiens Primates PKA PKA famplex_relations PRKACG 5568
Homo sapiens Primates MAP MAP ncbigene_synonym SGSM3 27352
Homo sapiens Primates NIK NIK ncbigene_synonym MAP3K14 9020
Homo sapiens Primates NIK NIK ncbigene_synonym MAP4K4 9448
Homo sapiens Primates Chuk CHUK ncbigene_symbol CHUK 1147
Homo sapiens Primates Stmn1 STMN1 ncbigene_symbol STMN1 3925
Homo sapiens Primates Naf NAF ncbigene_synonym CXCL8 3576
Homo sapiens Primates EGF EGF ncbigene_symbol EGF 1950
Homo sapiens Primates PKC PKC ncbigene_synonym PRRT2 112476
Homo sapiens Primates PKC PKC famplex_relations PRKCA 5578
Homo sapiens Primates PKC PKC famplex_relations PRKCB 5579
Homo sapiens Primates PKC PKC famplex_relations PRKCD 5580
Homo sapiens Primates PKC PKC famplex_relations PRKCE 5581
Homo sapiens Primates PKC PKC famplex_relations PRKCG 5582
Homo sapiens Primates PKC PKC famplex_relations PRKCH 5583
Homo sapiens Primates PKC PKC famplex_relations PRKCI 5584
Homo sapiens Primates PKC PKC famplex_relations PRKCQ 5588
Homo sapiens Primates PKC PKC famplex_relations PRKCZ 5590
Homo sapiens Primates PKC PKC famplex_relations PRKD3 23683
Homo sapiens Primates Mink MINK ncbigene_synonym KCNE1 3753
Homo sapiens Primates Mink MINK ncbigene_synonym MINK1 50488
Homo sapiens Primates Egfr EGFR ncbigene_symbol EGFR 1956
Homo sapiens Primates Braf BRAF ncbigene_symbol BRAF 673
Homo sapiens Primates Fgf9 FGF9 ncbigene_symbol FGF9 2254
Homo sapiens Primates PDGF PDGF famplex_relations PDGFA 5154
Homo sapiens Primates PDGF PDGF famplex_relations PDGFB 5155
Homo sapiens Primates PDGF PDGF famplex_relations PDGFC 56034
Homo sapiens Primates PDGF PDGF famplex_relations PDGFD 80310
Homo sapiens Primates GRB2 GRB2 ncbigene_symbol GRB2 2885
Homo sapiens Primates SOS SOS ncbigene_synonym XYLT2 64132
Homo sapiens Primates SOS SOS famplex_relations SOS1 6654
Homo sapiens Primates SOS SOS famplex_relations SOS2 6655
Homo sapiens Primates CREB CREB ncbigene_synonym CREB1 1385
Homo sapiens Primates CREB CREB famplex_relations CREB3 10488
Homo sapiens Primates CREB CREB famplex_relations CREB5 9586
Homo sapiens Primates CREB CREB famplex_relations CREB3L1 90993
Homo sapiens Primates CREB CREB famplex_relations CREB3L2 64764
Homo sapiens Primates CREB CREB famplex_relations CREB3L3 84699
Homo sapiens Primates CREB CREB famplex_relations CREB3L4 148327
Homo sapiens Primates CREB CREB famplex_relations CREM 1390
Homo sapiens Primates CREB CREB famplex_relations ATF1 466
Homo sapiens Primates CREB CREB famplex_relations ATF2 1386
Homo sapiens Primates MPI MPI ncbigene_symbol MPI 4351
Homo sapiens Primates MPI MPI ncbigene_synonym SLPI 6590
Homo sapiens Primates Elk-1 ELK1 ncbigene_symbol ELK1 2002
Homo sapiens Primates Elk-1 ELK1 ncbigene_synonym KCNH4 23415
Homo sapiens Primates Elk-1 ELK1 ncbigene_synonym KCNH8 131096
Homo sapiens Primates ERK ERK ncbigene_synonym EPHB2 2048
Homo sapiens Primates SRF SRF ncbigene_symbol SRF 6722
Homo sapiens Primates MEK2 MEK2 ncbigene_synonym MAP2K2 5605
Homo sapiens Primates Sapla SAPLA ncbigene_synonym PPP6R3 55291
Homo sapiens Primates Pdgfra PDGFRA ncbigene_symbol PDGFRA 5156
Homo sapiens Primates Mos MOS ncbigene_symbol MOS 4342
Homo sapiens Primates Mos MOS ncbigene_synonym MOCOS 55034
Homo sapiens Primates NFL NFL ncbigene_synonym NEFL 4747
Homo sapiens Primates G12 G12 famplex_relations GNA12 2768
Homo sapiens Primates G12 G12 famplex_relations GNA13 10672
Homo sapiens Primates Ptprr PTPRR ncbigene_symbol PTPRR 5801
Homo sapiens Primates OST OST ncbigene_synonym DDOST 1650
Homo sapiens Primates OST OST ncbigene_synonym MCF2L 23263
Homo sapiens Primates p38 P38 ncbigene_synonym CRK 1398
Homo sapiens Primates p38 P38 ncbigene_synonym AIMP2 7965
Homo sapiens Primates p38 P38 ncbigene_synonym GRAP2 9402
Homo sapiens Primates p38 P38 ncbigene_synonym AHSA1 10598
Homo sapiens Primates p38 P38 ncbigene_synonym POLDIP2 26073
Homo sapiens Primates JIP3 JIP3 ncbigene_synonym MAPK8IP3 23162
Homo sapiens Primates HSP72 HSP72 ncbigene_synonym HSPA1A 3303
Homo sapiens Primates HSP72 HSP72 ncbigene_synonym HSPA1B 3304
Homo sapiens Primates ARRB ARRB famplex_relations ARRB1 408
Homo sapiens Primates ARRB ARRB famplex_relations ARRB2 409
Homo sapiens Primates NFAT-2 NFAT2 ncbigene_synonym NFATC1 4772
Homo sapiens Primates NFAT-4 NFAT4 ncbigene_synonym NFATC3 4775
Homo sapiens Primates MLK3 MLK3 ncbigene_synonym MAP3K11 4296
Homo sapiens Primates Atf2 ATF2 ncbigene_synonym GDNF 2668
Homo sapiens Primates CASP CASP ncbigene_synonym CUX1 1523
Homo sapiens Primates CASP CASP ncbigene_synonym CYTIP 9595
Homo sapiens Primates CASP CASP ncbigene_synonym CRTAP 10491
Homo sapiens Primates MUK MUK ncbigene_synonym MAP3K12 7786
Homo sapiens Primates Akt3 AKT3 ncbigene_symbol AKT3 10000
Homo sapiens Primates p53 P53 ncbigene_synonym TP53 7157
Homo sapiens Primates p53 P53 famplex_relations TP63 8626
Homo sapiens Primates p53 P53 famplex_relations TP73 7161
Homo sapiens Primates cycl CYCL ncbigene_synonym CECR7 100130418
Homo sapiens Primates MLTK MLTK ncbigene_synonym MAP3K20 51776
Homo sapiens Primates TNF TNF ncbigene_symbol TNF 7124
Homo sapiens Primates TRAF2 TRAF2 ncbigene_symbol TRAF2 7186
Homo sapiens Primates TRAF2 TRAF2 ncbigene_synonym TANK 10010
Homo sapiens Primates ASK2 ASK2 ncbigene_synonym MAP3K6 9064
Homo sapiens Primates Fasl FASL ncbigene_synonym FASLG 356
Homo sapiens Primates Fas FAS ncbigene_symbol FAS 355
Homo sapiens Primates Fas FAS ncbigene_synonym FASN 2194
Homo sapiens Primates MKK3 MKK3 ncbigene_synonym MAP2K3 5606
Homo sapiens Primates DAXX DAXX ncbigene_symbol DAXX 1616
Homo sapiens Primates MKK6 MKK6 ncbigene_synonym MAP2K6 5608
Homo sapiens Primates MAX MAX ncbigene_symbol MAX 4149
Homo sapiens Primates CD14 CD14 ncbigene_symbol CD14 929
Homo sapiens Primates CD14 CD14 ncbigene_synonym NDUFA2 4695
Homo sapiens Primates LPS LPS ncbigene_synonym IRF6 3664
Homo sapiens Primates Tob2 TOB2 ncbigene_symbol TOB2 10766
Homo sapiens Primates PPS PPS ncbigene_synonym INPP5K 51763
Homo sapiens Primates PRAK PRAK ncbigene_synonym MAPKAPK5 8550
Homo sapiens Primates Traf TRAF famplex_relations TRAF1 7185
Homo sapiens Primates Traf TRAF famplex_relations TRAF3 7187
Homo sapiens Primates Traf TRAF famplex_relations TRAF4 9618
Homo sapiens Primates Traf TRAF famplex_relations TRAF5 7188
Homo sapiens Primates Traf TRAF famplex_relations TRAF6 7189
Homo sapiens Primates Traf TRAF famplex_relations TRAF7 84231
Homo sapiens Primates PP2CB PP2CB ncbigene_synonym PPM1B 5495
Homo sapiens Primates PP2CB PP2CB ncbigene_synonym PPP2CB 5516
Homo sapiens Primates HSP27 HSP27 ncbigene_synonym HSPB1 3315
Homo sapiens Primates HSP27 HSP27 ncbigene_synonym HSPB2 3316
Homo sapiens Primates ECSIT ECSIT ncbigene_symbol ECSIT 51295
Homo sapiens Primates Cdc25B CDC25B ncbigene_symbol CDC25B 994
Homo sapiens Primates Nur77 NUR77 ncbigene_synonym NR4A1 3164

Chemical mentions

Word Match MeSH Name ChEBI
Phosphatidylinositol Phosphatidylinositol 1-O-(3-sn-phosphatidyl)-1D-myo-inositol chebi:16749
CAMP cAMP adenosine 3',5'-(hydrogen phosphate) chebi:17489
Naf NaF sodium fluoride chebi:28741
EGF EGF L-alpha-glutamylglycyl-L-phenylalanine chebi:140739
DNA DNA deoxyribonucleic acids chebi:16991
DNA DNA deoxyribonucleic acids chebi:16991
Map MAP (6alpha)-6-methyl-3,20-dioxopregn-4-en-17-yl acetate chebi:6716
DNA DNA deoxyribonucleic acids chebi:16991
Fas FAS ammonium iron(2+) sulfate--water (1/6) chebi:76181
DNA DNA deoxyribonucleic acids chebi:16991
LPS LPS chebi:89981
DNA DNA deoxyribonucleic acids chebi:16991

Disease mentions

Word Match MeSH Name DOID