Protein interaction network created using STRING database based on Bos taurus genome

Protein interaction network created using STRING database based on Bos taurus genome. Edges represent protein–protein associations, line thickness indicates the strength of the supporting data, network nodes represent proteins, and colors indicate their functional categories: GO database—dark blue—GO:0032481 “Positive regulation of type I interferon production” (FDR = 9.69 × 10−13); green—GO:0002764 “Immune response-regulating signaling pathway” (FDR = 9.76 × 10−12); grey—GO:1901222 “Regulation of NIK/NF-kappaB signaling” (FDR = 3.33 × 10−6); KEEG-pathways—light blue—bta04620 “Toll-like receptor signaling pathway” (FDR = 1.53 × 10−32); pink—bta04621 “NOD-like receptor signaling pathway” (FDR = 3.48 × 10−16); yellow—bta04060 “Cytokine–cytokine receptor interaction (FDR = 8.74 × 10−9); light green—bta04612 “Antigen processing and presentation (FDR = 0.0187)
Protein interaction network created using STRING database based on Bos taurus genome

Publication

An Outbred Calf Model for Determining Innate Immune Sensing and Evolutionary Trajectories of a Cell Culture-Adapted Bovine Foamy Virus Variant (2023) Magdalena Materniak-Kornas, et al. Viruses. 2023 Aug;15(8). Figure: F5.

Gene mentions


Organism Group Word Match Source NCBI Symbol NCBI ID
Homo sapiens Primates CD40 CD40 ncbigene_symbol CD40 958
Homo sapiens Primates NLRP3 NLRP3 ncbigene_symbol NLRP3 114548
Homo sapiens Primates NFKB1 NFKB1 ncbigene_symbol NFKB1 4790
Homo sapiens Primates NFKB1 NFKB1 famplex_relations NFKB2 4791
Homo sapiens Primates TICAM2 TICAM2 ncbigene_symbol TICAM2 353376
Homo sapiens Primates TICAM2 TICAM2 ncbigene_synonym TMED7-TICAM2 100302736
Homo sapiens Primates TLR9 TLR9 ncbigene_symbol TLR9 54106
Homo sapiens Primates MYD88 MYD88 ncbigene_symbol MYD88 4615
Homo sapiens Primates TRAF6 TRAF6 ncbigene_symbol TRAF6 7189
Homo sapiens Primates IRF3 IRF3 ncbigene_symbol IRF3 3661
Homo sapiens Primates CD8A CD8A ncbigene_symbol CD8A 925
Homo sapiens Primates TLR3 TLR3 ncbigene_symbol TLR3 7098
Homo sapiens Primates CXCL10 CXCL10 ncbigene_symbol CXCL10 3627
Homo sapiens Primates CD4 CD4 ncbigene_symbol CD4 920
Homo sapiens Primates CD86 CD86 ncbigene_symbol CD86 942
Homo sapiens Primates IFNAC IFNAC ncbigene_synonym IFNA10 3446
Homo sapiens Primates IRF7 IRF7 ncbigene_symbol IRF7 3665
Homo sapiens Primates IL6 IL6 ncbigene_symbol IL6 3569
Homo sapiens Primates TLR7 TLR7 ncbigene_symbol TLR7 51284
Homo sapiens Primates IFNB1 IFNB1 ncbigene_symbol IFNB1 3456
Homo sapiens Primates TYK2 TYK2 ncbigene_symbol TYK2 7297
Homo sapiens Primates IFNAR1 IFNAR1 ncbigene_symbol IFNAR1 3454
Homo sapiens Primates DDX58 DDX58 ncbigene_synonym RIGI 23586
Homo sapiens Primates IL23A IL23A ncbigene_symbol IL23A 51561

Chemical mentions

Word Match MeSH Name ChEBI
CXCL10 CXCL10 chebi:138157

Disease mentions

Word Match MeSH Name DOID